Pseudomonas poae RE_1-1-14, H045_12255 (gltX)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas poae RE*1-1-14, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGCGCCGTGAAAAGCAGATTGCCTTCAACCTCGAACATGGCATTACCCCCAAGGGTGTGTTCAAGGACGTCGCCGACATCATGGAAGGCGCCACCGTG CCGGGCTCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCCGCCGAGGAAAGCGCCAAGTACGAGAACGAATTGCGCTCGCCGAGTGAGATCACCAAGC GGATTCGCCAGTTGGAAGAGAAGATGTACCAGTTGGCACGCGATCTTGAATTCGAGGCGGCGGCGCAGACGCGTGATGAGATTGGCAAATTGCGCGAGCG GTTGCTGGCTGTGTGATTTGTAATGGTAGTGCCGGCCTCATCGGGGGCAAGCCCCCTCCCACCTTGATGTGTGAACACGGTCAAATGTGGGAGGGGGCTT GCCCCCGATAGCCGCGCCTCGGTTTTCCAGATATCACCCAGGCTGTTACCATTCGCCCCTTGTTTCAATTTTCAGTTATATCGCCCATTCGAGACCTGCC
|
|
| DNA Sequence for Gene |
>H045_12255
|gltX
ATGACCACCGTCCGCACGCGCATCGCGCCATCGCCTACCGGCGATCCTCACGTCGGCACTGCTTACATCGCCTTGTTCAACTACTGCTTTGCCAAGCAGC ACGGCGGTGAATTCATCCTGCGGATCGAAGACACTGACCAGTTGCGCTCCACCCGCGAGTCGGAACAGCAGATTTTCGATGCCCTGCGCTGGCTCGGCAT CACCTGGGCCGAAGGTCCGGACGTTGGGGGGCCGCACGGCCCGTATCGCCAGAGCGAGCGTAGCGATATTTACAAGCAATACACTCAGCAGCTGGTCGAC ATGGGCCATGCGTTCCCATGCTTCTGCACCGCTGAAGAGTTGGACCAGATGCGCGCCGAGCAACAGGCCCGTGGCGAAACCCCGCGCTACGACGGCCGCG CGCTGTTGCTGTCGAAAGAAGAAGTGGCCCGCCGCCTGACGGCCGGCGAGCCCCATGTGATCCGCATGAAGGTGCCGAGCGAAGGCGTTTGCGTGGTGCC GGACATGCTGCGCGGTGACGTCGAGATCCCGTGGGACCGCATGGACATGCAGGTGCTGATGAAGACCGACGGTCTGCCGACGTACTTCCTGGCCAACGTG GTCGACGATCACCTGATGGGTATCACCCACGTGCTGCGCGGCGAAGAGTGGCTGCCGTCGGCACCGAAACTGATCCTGCTCTATGAGTACTTTGGCTGGG AACAGCCGCAGCTGTGCTACATGCCGCTGCTGCGTAATCCGGACAAGAGCAAGCTGTCCAAGCGCAAGAACCCGACCTCGGTGACGTTCTACGAGCGCAT GGGTTTCATGCCCGAAGCGATGCTCAACTACCTGGGCCGCATGGGTTGGTCGATGCCCGACGAGCGCGAGAAGTTCTCGTTGCAGGAAATGGTCGATAAC TTCGACCTGTCCCGCGTGTCGCTGGGCGGGCCGATCTTCGATATCGAAAAACTGTCGTGGCTCAACGGCCAGTGGCTGCGTGACTTGCCGGTAGAAGAGT TCGCCAGCCGCGTGCAGCAGTGGGCGTTGAACCCTGAGTACATGATGAAGATCGCGCCGCTGGTGCAGGGCAGGGTGGAGACGTTCAGCCAGGTCGCGCC GTTGGCCAGCTTCTTCTTTGCCGGTGGCGTGAACCCGGACGCGAAGCTGTTCGAGTCCAAGAAGCTGTCGGGCGACCAGGTGCGCCAGTTGATGCAGCTG ATTCTGTGGAAGCTCGAAAGCCTGCGCCAGTGGGAAAAGGATGCGATCACTGCGACGATTCAGGCGGTGGTCGAGTCTCTGGAATTGAAGCTGCGCGATG CCATGCCTTTGATGTTCGCTGCGATCACCGGGCAGGCCAGTTCAGTGTCGGTGCTCGATGCAATGGAAATTCTGGGGCCGGACCTCACGCGCTTCCGTCT ACGCCAAGCCCTTGATTTGCTGGGCGGTGTTTCCAAGAAAGAAAACAAGGAATGGGAAAAGCTGCTGGGCGCTATCGGCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCCTCTGTGGCAGCGACGAAACCCCGGCTTTCCGGGGTTTCGTTGGTAAGTGATTGTTATCCCGGCAAAAAACTTTGGAAATTGTTGAAAATAAATTTG ACACACTTCCAAACCGCCATTAAGATTCGCCCCGTCCTCACCGATGAGGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAACGG TTCGATCCCGTTTAGCTCCACCAATTTGCAGGTTCAAGGTCTGGCCACACCGTCCTTGAATCGATCAGCACTCAGCGCTGATCCGTTGTATAGAAGGTTT TGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTCAACAAGCAGCTCGAAAGG TCTGCTGCGCCGCCAGGCGAAAAATCGGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCAACGGTTCGATCCCGTTTAGCTCCAC
|
|
| Amino Acid Sequence |
>glutamyl-tRNA ligase
MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGITWAEGPDVGGPHGPYRQSERSDIYKQYTQQLVD MGHAFPCFCTAEELDQMRAEQQARGETPRYDGRALLLSKEEVARRLTAGEPHVIRMKVPSEGVCVVPDMLRGDVEIPWDRMDMQVLMKTDGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWEQPQLCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDN FDLSRVSLGGPIFDIEKLSWLNGQWLRDLPVEEFASRVQQWALNPEYMMKIAPLVQGRVETFSQVAPLASFFFAGGVNPDAKLFESKKLSGDQVRQLMQL ILWKLESLRQWEKDAITATIQAVVESLELKLRDAMPLMFAAITGQASSVSVLDAMEILGPDLTRFRLRQALDLLGGVSKKENKEWEKLLGAIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|