Pseudomonas poae RE_1-1-14, H045_11340
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas poae RE*1-1-14, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGGCTCATGGTGTCTCGGCCGCCGCGCTGTTTATCCTGAGTGGTCAGCTGTACGAGCGTCTGCACACCCGTGACATGCGTGAAATGGGTGGCGTGTGG TCGCGCATCGCGTACCTGCCGGCGATCAGCCTGTTCTTTGCCGCTGCGTCGTTGGGCTTGCCGGGTACCGGAAACTTCATCGGCGAGTTCCTGATCCTGA TGGGGGCCTTTGTGCAGACGCCATGGATCAGTGCGATTGCCACCTCCGGCCTGGTATTCGGTTCGGTCTACTCGCTGATCATGATCCACCGCGCCTACTT CGGCCCGGCCAAGTCCGACACCGTCCTGCAAGGGATGGATGCGCGCGAACTGATCATGGTGCTCGGCCTTGCGTTGCTGCTGATCTACATCGGCGTGTAC CCGCAACCGTTCCTGGACACGTCTGCCGCCACGATGCATGGCGTGCAGCAGTGGTTCGGCACCGCCTTCTCTCAACTCGCTTCGGCCCGGTAAGAGCGCT
|
|
| DNA Sequence for Gene |
>H045_11340
ATGGAATTCACGATCCAACACTTTATCGCGCTTGCGCCGCTGCTGATCACCAGCCTCACCATCGTGGTGGTGATGCTGGCGATCGCCTGGCGCCGCAATC ACTCGCAAACGTTCCTGCTGTCCTGTGCCGGTCTGAACCTGGCCCTGCTGTCGATCATCCCGGCGCTCAAGGTGGCACCACTGGCGGTCACGCCTTTGAT GATGGTCGATGACTTCGCGCTGCTGTACATCGCGTTGATCCTGGTCGCGACCTTGGCCTGCGTCACCCTCGCCCACGCCTACCTCGGCGAAGGCGGCACC GGTTACCCAGGCAACAAGGAAGAGCTGTACCTGCTGATCCTGCTGGCGGCGGCCGGCGGTATCGTGCTGGTCAGCGCACAGCACCTGGCGGGCCTGTTCA TCGGCCTGGAACTGCTGTCGATCCCGACCTACGGCTTGGTGGCCTACGCCTTCTTCAACAAGCGCTCTCTGGAAGCCGGCATCAAGTACATGGTGCTGTC GGCGGCAGGTTCGGCGTTCCTGTTGTTCGGTATGGCCCTGCTCTACGCCGAAGCCGGCAGCCTGAGCTTCACCGGTATCGGTCACGCCCTGGCCACCACC AGCATGCCTGCGCCGATTGCCCAACTGGGCCTGGCGATGATGCTGATCGGCCTGGCTTTCAAGCTGTCGCTGGTGCCGTTCCACCTGTGGACCCCGGACG TGTACGAAGGCGCCCCGGCGCCAGTGGCTGCGTTCCTGGCGACCGCATCGAAGGTGGCAGTGTTTGCGGTGATGGTGCGTCTGTTCCAGATCTCGCCTGC GGCCAACACCGGTGTGCTGAGCAACGTACTGACCGTGATCGCCATTGCGTCGATCCTGTTCGGCAACCTGCTGGCACTGACCCAGAACAACCTCAAGCGT CTGCTGGGTTACTCGTCCATCGCCCACTTCGGCTACCTGCTGATCGCCCTGGTGGCGAGCAACGGCCTGGCCGTGGAAGCCATCGGCGTGTACCTGGTCA CCTACGTGATCACCAGCCTGGGCGCGTTCGGCGTGATCACCCTGATGTCCTCGCCGTACAAGGGCCGTGACGCCGACGCGCTGTACGAATACCGCGGCCT GTTCTGGCGCCGTCCGTACCTGACCGCCGTCCTCACTGTGATGATGTTGTCCTTGGCGGGTATCCCGCTGACGGCGGGCTTTATCGGCAAGTTCTACATC GTTGCTACCGGTGTTGAAGCGCACCAATGGTGGCTGGTTGCGTCCTTGGTACTGGGCAGCGCCATCGGCGTGTTCTACTACCTGCGCGTGATGGTCACCC TGTACCTGATCGAGCCGAACCTGCGCCGCGTCGACGCCGAGCTGCACTGGGAACAGAAGGCAGGCGGCGTGATGCTGCTGGCCATCGCCCTCCTCGCGTT CTTCCTGGGCGTGTACCCACAACCGTTGCTCACCCTGGTGCAGCATGCGGTGCTGGGCGTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGCTTAGTCAAATGCAGTAAACAGAACGGCGCCTTCGGGCGCCGTTTTGCGTTTCTGGGGCGTGCGGCCTCTGCCCTTCCCTGTTCGCGGAATTTTCCT GTTCCATCTACCTCTTCATCTGGCATCCATGCGTTTGAGGCGACCTTATGGTGGTTGCGTTTTAAGAAGGTTCCCACAGCACGGTCACTTGACACCCTTG CGAGTGGGTCAGCAAACTATACGCAGGCTACGTACATAACATGGATGCTCTATTTATCGAACTGCCGGCCTTCGAGCGGCATCGCAAGGATTATCTGAGT GACGAGCTTTTCCACGGTTTTCAACAGGTGTTGATGAAAAACCCGGAAGCGGGAGACGTGATCGAAGGCACCGGCGGATTGCGCAAGGTTCGCTTCGTCG ATCAGCGGCGCAACAAAGGTAAACGCGGTGGCCTGCGAGTCATTTACTACTGGTGGTCAGGCGGCACTCAATTCTGGCTGTTCACCCTGTACGGCAAGCA
|
|
| Amino Acid Sequence |
>NADH:ubiquinone oxidoreductase subunit N
MEFTIQHFIALAPLLITSLTIVVVMLAIAWRRNHSQTFLLSCAGLNLALLSIIPALKVAPLAVTPLMMVDDFALLYIALILVATLACVTLAHAYLGEGGT GYPGNKEELYLLILLAAAGGIVLVSAQHLAGLFIGLELLSIPTYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYAEAGSLSFTGIGHALATT SMPAPIAQLGLAMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVMVRLFQISPAANTGVLSNVLTVIAIASILFGNLLALTQNNLKR LLGYSSIAHFGYLLIALVASNGLAVEAIGVYLVTYVITSLGAFGVITLMSSPYKGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI VATGVEAHQWWLVASLVLGSAIGVFYYLRVMVTLYLIEPNLRRVDAELHWEQKAGGVMLLAIALLAFFLGVYPQPLLTLVQHAVLGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|