Pseudomonas poae RE_1-1-14, H045_09350
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas poae RE*1-1-14, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGGACACCTGGAGCGTTGCACGCAAACTGCACGCCGCCCACGCCTTCGCCAGCCAACTGGCTGGCGACCCCGCCATCGGCCTGCCGCCGCTGCTCGCCCA TGACCTGCTCGAACGCATGCGCGAACCGTTCGAGATCGTGTTCGTTTAGCTCCCTGGCCCCAGTCCCGCTCAGTTAAGCGAACGCAATGCTAGAAGCAAT GAAGATCAACTGTGGGAGCGGGCTTGCCCGCGAAGGCGTCGGCCCAGCAAACATTGATGCTCGCTGACACACCGCTTTCGCGGGCAAGTCGCCCCGCCGC TCCCATGGGGGAATCTGCACTTAACTCAACCGCATTGGCCCTCGCCCCTGGCATTTTAAACGTCAGACCAATGTGAAAAATTCGTTAACCAATTCTGCGC AAAGGCTTTTTTGCCCGTACACCTTCTGTCACACTGATGCGAATAATTATCAACCGTTTTATTATTCGCCAGGGAAGGCGCATCGGGGAGAGTTTGTTCC
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| DNA Sequence for Gene |
>H045_09350
ATGTCTGTGCAACAACAAGGCACCACTGTTTTCGCACCCACTTTGATCGCGCTGGCCATCTGTCTTGCCAGCTCACACGCGGCCTTTGCCGCCGATGTCG AGCCCTCCTCCGGCCCTATCGAACTGGGCGCCACGCAAGTCTCCGGCGAGGGGCAACTGGGCGAAACCACCGAGGGCACGCAGTCCTACACCACCGGCGC GATGAAAACCGCGACCAAGCTGCCACTGACCCTGCGTGAAACCCCGCAGGCCGTCACCGTTGTCACCCGTCAACGCATGGACGACCAGGCGATGACCAGC ATCAATGACGTGGTCGCCGCCACGCCGGGGCTGTTCCTGAATTTCTCCAACGGCCCTGGCCGGCAGTCGTACACCGCGCGCGGCTTCGACATCGACAACC TGATGTACGACGGCATCCCGAGCGGCTACAACGGCGTCAACGTGGGTGCCCAGCCGAACCTGGCGATGTTCGACCGCGTCGAGGTGGTGCGTGGTGCTAC AGGCCTGGTCACCGGCGCGGGTAACCCGTCAGCCGCCATCAACCTGATCCGCAAGCGGCCGCTGGATGAGCAGAAAGTCACGCTCACTGGCGCGGCCGGC ACCTGGGACAACTACCGTGGCGAATTGGACGCCTCGAGCCCGCTCAATGACAGCGGCACCTGGCGCGGCCGGGTGGTGACCTCCTACCGCGACGCCAACA GCTTCATCGACAATGTCGGGGATTATCACGGGCTGTTCTATGCAGTCACCGAAGCGGACTTAAGCGAAAACACCAGCCTGACCCTGGGTTTCTCCAACCA GAAGGACAAGACCAACTACTTCTGGGGCTCGTCGATGGTGGGCCAGGACGGTCACCACTTGAACCTGTCGCGCGCCTACAACCCCGGTACACGCTGGGAG AACAAGGACCAGGAAATCAACACGGTTTTTGCCGAATTGCGCCAGCAACTGGCCAACGACTGGAAACTGCAGGTCAATGCCAACTACGCCGAACAGAACG CCCTGTTCTCCGGCTCCTATCAATCCCGTTGGACCAACAACACCTTGGCCCGCACCGTTTACCAGTCTGCTGCGGATGAAAACCAGGCGGGCCTCGACGC CTTTGTCAGTGGCCCCTTCCAGGCGCTGGGGCGCAGCCATGAGTTGGTGATGGGTGCCAGCCGTCGCATCTACGACCTGACCACCCACAGCTACTCGCCG TTCGACATGAACTGGCCGCTCAACGCGGGCAAGCCGGACTTCGTCCACACGTCCAACGGTCGTGAAGTCACCACCCAGGACGGCGTCTACGTGACCACGC GCCTGAGCCTGGCCGACCCGTTGAAGCTGATCCTCGGCGCGCGCCTGGACTGGTACGACTACGACAACCATGATGGCGACGGCGATTACAAGGTCACCCG CAACCTCACCCGCTACGCCGGCTTGATCTATGACCTGGACGACCATCATTCGGTGTATGCCAGCTACAGCGACATCTTCACCCCGCAGACGGCCAAGGAC ACGTCCGGCACGCCGGTCAGGCCCATCATCGGCAAGAACTACGAGGTGGGCATCAAGGGTGAATACCTGGGTGGCGCGCTGAACGGGAGCGTGGCGCTGT TCCGCGTCGACCAGCAGAACCGCGCCGTCGACGTGGTGGTGCCGAACTGCCCGCAGGCCTCCTGCGCTGAGGCCTCGGGCGAAATTCGCAGTCAGGGTAT CGACTTCGAACTGCAAGGCGCCCTCACCGAACACTGGCAGGTGGGCGGTGGCTACACCTATGCGCGTACCCACGTCATCAAGGACCAGGCCAACCCGCAG ACCGTGAACAAGCAGTTCGACACCGACACTCCGGAACACCTGTTCAAGCTCACCACGCGCTACAACTTTCAGGGCCCGCTGGAAAAACTCCGCGTGGGCG GCAACATCTCCTGGCAGAGCCGCATGTACAACGACCTCACTGTGGCGGATGGCAGCAGCTACCGCCTCAAACAGGGCGCCTATGCCGTCACCGACCTCAT GGCCGGCTACCAGGTCAATCAACATCTGGACCTGCAGCTCAACGCCAACAACATCTTCGACCGCAAGTACTACGAGACCATCGCCAACTCCGTCGACTAT GGCGGCGATTCCTATGGTGCCCCTCGCAACATGATGCTGACCGCCAAGTACAGCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTCCTTCGGCTGCCCGCCCGGGCAGCCGTTGCTGGCTTAAAGTCCCGCCCGGGCTGGCCGATAACGCCCCTGAAGCGCAAAAAGACAACGATTCGCTT CACTCAGCAGGCGGCCCTTGCTGGCACGCCCCATGCTTTGTTCCTGGCCAAACCACAAGGAGTAAACGTGAATGCCCGTCCCCAGCCCCTTTTTGGAGCA CTACCGCAAGGCAGACCGCATCATGCTGGCGCTTATCTGGCTGATGTTCCTGTTCTCCCTGGGCCTGGCGTTCTGGCATGACACCCTGATACAGGCACTG ACGGTCGGCGGCGGCACCGGTTTGGTGCTCACCGTGTTGTACCGCGCCATCGGTGGCAGCCGGCTGATGCGCTGCGCTTTGGGGGCCGGCCTGATGGTGA TGGCCGCGCTGCACATCAACCAGGCCCAGGGCGTGATCGAATCGCACTTCGGGATCTTTGCGCTGTTGGCCGTGCTGACCTTTTACCGAGACTGGCTGCC
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| Amino Acid Sequence |
>putative ferric alcaligin siderophore receptor
MSVQQQGTTVFAPTLIALAICLASSHAAFAADVEPSSGPIELGATQVSGEGQLGETTEGTQSYTTGAMKTATKLPLTLRETPQAVTVVTRQRMDDQAMTS INDVVAATPGLFLNFSNGPGRQSYTARGFDIDNLMYDGIPSGYNGVNVGAQPNLAMFDRVEVVRGATGLVTGAGNPSAAINLIRKRPLDEQKVTLTGAAG TWDNYRGELDASSPLNDSGTWRGRVVTSYRDANSFIDNVGDYHGLFYAVTEADLSENTSLTLGFSNQKDKTNYFWGSSMVGQDGHHLNLSRAYNPGTRWE NKDQEINTVFAELRQQLANDWKLQVNANYAEQNALFSGSYQSRWTNNTLARTVYQSAADENQAGLDAFVSGPFQALGRSHELVMGASRRIYDLTTHSYSP FDMNWPLNAGKPDFVHTSNGREVTTQDGVYVTTRLSLADPLKLILGARLDWYDYDNHDGDGDYKVTRNLTRYAGLIYDLDDHHSVYASYSDIFTPQTAKD TSGTPVRPIIGKNYEVGIKGEYLGGALNGSVALFRVDQQNRAVDVVVPNCPQASCAEASGEIRSQGIDFELQGALTEHWQVGGGYTYARTHVIKDQANPQ TVNKQFDTDTPEHLFKLTTRYNFQGPLEKLRVGGNISWQSRMYNDLTVADGSSYRLKQGAYAVTDLMAGYQVNQHLDLQLNANNIFDRKYYETIANSVDY GGDSYGAPRNMMLTAKYSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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