Pseudomonas poae RE_1-1-14, H045_06690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas poae RE*1-1-14, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCCTGGCAAAGCCCGAACCGTTTAACAACCTTCGTCCTGTACGCAGTGGCCTACTCTTATGTCGAACACGTATCTGTCCAAGCTTGAAGATTCACTGA GACTGCACACCACCCGCCTGAAAAAGTTGCAGCGGCTGTGGGTGCCCTTGCAGCAGCGCGCACCAAAATGGGTCCTGGGACTGTGGATTCTTGGGGTGTT CTTCTCGTTGATCACTGAGTTTTATGCGCACTGGATGGTGACCGCGCCATTGATTCTTGCGTTGATCGTCGCCGAAATCGTGATCGATGAGCGGCAAATG ACACTGTCCTTGCAAGCCGACAAGCTGCGCGACCTGCTCAGGACCGCCAGGCATCGCTATGCCTGCCCCTGAGGGTTATGTGCCTGGCGCATGACCCATT CTTAAACGTCATAACGCTGATTTCATCTGCGTGGTAGGCTCGCTGGTTTATAAACAGGCATTGATCGTGCATTAGACGATGGCCAGAACCAGGAAAGATC
|
|
| DNA Sequence for Gene |
>H045_06690
ATGCCAAAAATTTCCCACTCAGCGCTTCGCTGCAATTTTCGTGAGTTGCTTGCCGCACCCCAGTGCGTCGAAACAGCTTCTGTGTTTGACCCGATGTCCG CTCGCATTGCGGCCGACCTGGGGTTTGAGGTCGGCATCCTGGGCGGCTCGGTCGCCTCATTGCAGGTGCTGGCGGCGCCCGATTTTGCGCTGATCACCCT CAGCGAATTCGTCGAACAGGCCACGCGCATCGGCCGCGTCGCCCAGCTCCCCTTTATCGCTGATGCCGACCATGGTTATGGCAATGCCCTGAACGTGATG CGCACCGTCGAAGAACTCGAACGCGCCGGCGTCGCCGCGCTGACCATCGAAGACACCCTGCTGCCTGCGCAATTCGGACGCAAATCCACCGACCTGATTT CCATCGACGAAGGCATCGGCAAGGTCCGGGCCGCCCTCGAAGCCCGGGTCGATCCGGCGCTGTCGATCATCGCGCGCACCAACGCCGGCGTGCTGCCCAC AGAGGATGTGATCAAGCGCACCAAGGCCTACGAAAAGGCCGGTGCCGACGGCATCTGCATGGTCGGCGTCAAGGACTTCGAGCACCTGGAGCAGATCGCC GAGAACCTCAGCGTTCCGCTGATGCTGGTGACCTACGCCAATCCCGCGCTCAACGACGCAGAGCGCCTGGCCAGCCTCGGCGTGCGCGTGGTGGTGGCCG GACATGGCGCCTACTTTGCGGCCATCAAGGCCACTTACGACAGCCTGCGCGCGCAGCGCCAACTGACCCACCGCACCTCCAACCTCAGCGCCACCGAACT CACCCACACCTACACGTTGCCTGCCAGTTACATGGCGTGGGCCGAAGAGTTCATGGACGTCAAAGAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCTGACAGGCATGCTCCAGCACCACTTCCAACGGGTGGCGCAGGTGCTTGCCGGCTTGACGCTTGACCTGGCTGCGGCAGGAATACCCCGTGGCCAGCG CTTCACCAGGCTGGTCCAGCTTGCCGGCCCATGACTGCTCGAAAATAGTCTTCGACGTGTGCTGATTGCGCGCCTCATGGCCGTAGGTGCCGGACATGCC GCAGCAGCCACTCGCCTCGCTGAGCAGTGTGAGGCCCACTCGGGCAAACACGGCTTGCCACTGCGCGGTACTTGCCGGCACGTTGGTCTTTTCGGTGCAG TGCGCCAGCAGCCGGAAGGTCTGCGGGCGTTGGGACGCGCGGTCCGGGAGCGCATCGAGCAGCCATTCCTGAGGCAGCAGCACCGTGGGGCATTCGCCTA TTCCCGGCACCTTGCGGTACTCCTGGCGATACACCAGCGTCATCGCCGGATCCAGGCCCACCAGCGGCACGCCACAGTCGGCCAGCGCCTTGAGCTGCGC
|
|
| Amino Acid Sequence |
>hypothetical protein
MPKISHSALRCNFRELLAAPQCVETASVFDPMSARIAADLGFEVGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVAQLPFIADADHGYGNALNVM RTVEELERAGVAALTIEDTLLPAQFGRKSTDLISIDEGIGKVRAALEARVDPALSIIARTNAGVLPTEDVIKRTKAYEKAGADGICMVGVKDFEHLEQIA ENLSVPLMLVTYANPALNDAERLASLGVRVVVAGHGAYFAAIKATYDSLRAQRQLTHRTSNLSATELTHTYTLPASYMAWAEEFMDVKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|