Pseudomonas poae RE_1-1-14, H045_04840
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas poae RE*1-1-14, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGACGCCAACACGCGCCTGCTGGAGATCCTCAAGGATTACCGCGACCACCTCACCGCTGCCGTGGTGCATTGCTTTACCGGCGAACAGGCGGCGCTGTTC AGCTACCTCGACCTCGACTTGCACATTGGCATCACCGGCTGGATCTGCGACGAACGCCGTGGGACGCACCTGCATCCGCTGGTCAGGGAAATTCCCCGTG GCCGTCTGATGCTGGAAAGCGACGCGCCCTACCTGCTGCCACGCACGCTGCGGCCCAAGCCGAAAAACGGGCGCAATGAACCAGCTTATCTGCCGGAGGT GCTGCGCGAAGTCGCCCTGCACCGTAACGAAAGCGCTGAAGACCTGGCCCGACACAGCACCGCCTGCGCCCGCGCCTTTTTTGGATTACCCGTCGTGGCG TGATACAGCGCATTGACCCATATCAACAAAGGCGTTGCTGAGTAGCGGCACAATAATGGCACCTTGCCAATACTGTTCCCGCTATCAGAGAAAACCTTCC
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| DNA Sequence for Gene |
>H045_04840
ATGGGTGCCTGGCTTAGCAACATCTCGCTGAAATACAAATTCTGGGCGGTCAACGCGGTCGCCTTCATCACCACCCTGCTGCTGGTGCTGTACGCCGTGC AGTTGGAGCAACAGGCGCGCAGCCAGGCGTCCCAGGCTTCGGCGCAGGCGCAAGGTCGCTTGCTCAGCGCCTGGCCTGCCGATAAGCCGCTGCCTTCCGG CGAGTCATGGCTGACGTTTACCGACGATCAAATCCCACAGGATCTGTCAGCCTTGAAAGGCGCCAGCGGCTGGGTCGAACTGAAACATGAGCCGCTGTTC GGCGAAAACCCGCTGACCGGCGCTGAAGTGATCAACCGCGTCGATGGCCAACACATAGCCATTCTGGCCCATGCACCCAGCCTGAGCCAGGTGCTGAGCG AACGCTTCACCCGCTACGCCGCGGCGGTGGCGATTCTGATGCTGGCGATGCTGGGCGCCTCGCAACTGTTGATCCGCTTCCTGCTCAGCCAGCTCAACAC CCTCAAGGACATCATGTTGCACGTGGAGAAAACCGGCGACCTGTCGGCGCGCGTGCCGCTGGCATGCAAGGACGAAGTCGGGCAGATGGCCAGTGCCTTT AACGCCATGCAGGCTGGCTATCAAAGGGTGGTGAATACCGTCGCGAACACCGCCCGGCAACTGGACGAAGGCGCCGCACGACTGGCCAGCAGCATGAATG AAGTGCAGCACGGCATGCTCGGTCAGCAGAGCGAAACCGACCAGGCCGCCACCGCGATCAATGAAATGACGACCACCGTTCACCATATCGCCCAGCACGC CGGCGCCACACGCGACCTGTCGCAGGCCGCCGACACCCTCGCCGGCAGCGGCCAGGCCGTGGTCACCCGTGTGCAGCATTCGATTGCCGGGCTGTCCACC GGCGTGCAGCAAACCGCCGAAATGATCCAGAAACTTGCCGAAGACAGTCACAAGATCAACAGCGTGGTCGGGGTCATTCACAGCATCGCCGAACAAACCA ACCTGCTGGCGCTGAATGCGGCCATCGAAGCCGCCCGCGCCGGAGAAATGGGCCGTGGCTTTGCCGTGGTCGCCGACGAAGTACGCAACTTGGCCAAACG CGTGCAAAGCTCCACCGACGAAATCACCGGCATGGTGTCAGCCCTGCAAGCCGGCACTCGCGACGCGGTGGACTTCATGCAGGAAAGCTCGTTCAAGGCC GACGACTGCGTACAGCAAGCACAGGAAGCGGGCGCCGCACTGGCCGACATCACCCGCGCCGTGGCGCAGATGCGCGAGAGCAACACGCAGATCGCCGTCG CCGCCGAGCAGCAAAGCCACGTCGCCGAAGAAATGAACCGCGCGGTGGTGAGCATTCGCGATGTGACCGAAAACACCGTGCGGCAGACGGTGGGTTCGGC CACGACCAGCAGTGAGCTGGCGACGCTGGCAGGTGAGCTGAGCAAGGCGATTGGGCAATTGAAGCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCTATTCAACCCGTAATCCGGTTCCTACAACCGGGCCTCAGTTACCTTGAAGCTTTGGCGAAATTTCCTAGCTATCCCCACGAATAACGCCGACTTCTT TTATCTCCCAACCTCTGCAAAGTCCTTCGCCTGATCACACAGTGCGAGGGACTGCAGATGGATTTGCTGGCTAAAGCCCCCGGTTACGGGGCTGTTTCAT GATTCCGGTCATTGCCAAGCTGGTGCTGACACCAATGGACGCCACGGCACCAGACGTCGAAAGCGTTTTTCGTGACTTTCGCGATTGCCTGAACACCTTC GACACCTGGGCCGAGCGTTTTTGGAGCGGCTCGGCGCTGGAGCTTGAACAAGTCTTCAACGTCGGCGAAGACGTCACACTGAGTGCGCCGGTGTCTTCGC GCACGCCAAGCGCTGTTGTCGCGACCTGCCCGGCCCAGGGTTCGCTGACCCTGGTGCATCTGTTCGAAAGCACGCGCCTTGTGCCCATCGGTAATACCCC
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| Amino Acid Sequence |
>putative methyl-accepting chemotaxis protein
MGAWLSNISLKYKFWAVNAVAFITTLLLVLYAVQLEQQARSQASQASAQAQGRLLSAWPADKPLPSGESWLTFTDDQIPQDLSALKGASGWVELKHEPLF GENPLTGAEVINRVDGQHIAILAHAPSLSQVLSERFTRYAAAVAILMLAMLGASQLLIRFLLSQLNTLKDIMLHVEKTGDLSARVPLACKDEVGQMASAF NAMQAGYQRVVNTVANTARQLDEGAARLASSMNEVQHGMLGQQSETDQAATAINEMTTTVHHIAQHAGATRDLSQAADTLAGSGQAVVTRVQHSIAGLST GVQQTAEMIQKLAEDSHKINSVVGVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQSSTDEITGMVSALQAGTRDAVDFMQESSFKA DDCVQQAQEAGAALADITRAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVRQTVGSATTSSELATLAGELSKAIGQLKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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