Pseudomonas poae RE_1-1-14, H045_04620
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas poae RE*1-1-14, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGGTGTGCGGATTCGCACTGTCGGCCCTGATTGGCCGGTCGGCATCACGATTCCCAAGGCAAGAGGGGCGGACGGCAGATTGTCTGATATTCGGCTTAAT TTCGCGTCGGGCATGCCCTGAGCGACGCGTGGGGGTACGTGACGTTCGGTCCTTGAAGTACGACGACGGGTAGCGGCTATTTTATCGGCTGGAATGTCGA TTTATCGCCGGTGAATATGCCTGGCCTTCGCGTCTGAGCCCCTGTCGTCCCCCTCAAGCCTGTCATCCGTCAAATTACTAGCCTCCATGCGCATCAGGGG GATAGGTGCGTGGCGGCGATTGTGATAACATCCGGCGGTTTCCAGGGCCGCCCAAAGGGGTTGCCTGTAACGTGCAGATCCGTGTCATAACTCGTTGATT TGTCGTAAGTCGTTGCCAGGCACCCTGCCGGCAGCGGCGAGCTTCGTTCATCCCGAATGGATGTGACGAGGTTTCACCCGAAAAAGGAATCAGGCTTCTC
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| DNA Sequence for Gene |
>H045_04620
ATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTACCTCGACTACGCAATGAGCGTAATCGTGGGTCGGGCAC TGCCTGATGCGCGCGATGGCTTGAAGCCCGTGCACCGGCGTGTGCTGTTCGCGATGAGCGAGCTGGGTAACGACTGGAACAAGCCGTACAAGAAATCTGC CCGTGTTGTCGGTGACGTGATCGGTAAGTATCACCCTCACGGCGACACCGCGGTGTACGACACCATCGTTCGAATGGCCCAGCCATTTTCCCTGCGCTAC CTGCTGGTAGACGGCCAGGGCAACTTCGGTTCGGTCGACGGCGACAACGCCGCGGCCATGCGATACACCGAAGTGCGCATGACCAAGCTGGCGCACGAGC TGCTGGCCGACCTGCACAAGGAAACCGTGGACTGGGTGCCGAACTACGACGGCACCGAAATGATCCCGGCCGTCATGCCCACCCGTATTCCCAACCTGTT GGTCAATGGCTCCAGCGGTATCGCCGTGGGCATGGCCACCAACATCCCGCCGCACAACCTCGGTGAAGTCATCGACGGTTGCCTGGCCCTCATCGACAAT CCCGAGCTGACCGTCGATGAGCTGATGCAATACATCCCCGGTCCGGACTTCCCGACCGCCGCGATCATCAACGGTCGCGCCGGCATCATCGAAGCCTACC GCACCGGCCGCGGCCGCATTTACATGCGCGCCCGCTCGATCATCGAAGACATCGACAAGGTCGGTGGTCGCCAGCAGATCGTCATCACCGAGCTGCCTTA CCAGCTGAACAAGGCGCGTCTGATCGAGAAGATCGCCGAGCTGGTTAAAGAGAAGAAGCTGGAAGGCATCACCGAGCTGCGCGACGAGTCCGACAAAGAC GGCATGCGCGTGGTGATCGAGCTGCGTCGTGGCGAAGTGCCCGAGGTGATCCTCAACAACCTCTATGCCCAGACTCAGCTGCAAAGCGTGTTTGGTATCA ACGTGGTTGCACTGATCGACGGCCGCCCACGCATCCTTAACCTCAAGGACCTGCTGGAAGCCTTCGTGCGCCACCGCCGCGAAGTGGTCACCCGCCGTAC CGTGTTCGAACTGCGCAAGGCCCGCGAGCGCGGTCACATCCTGGAAGGCCAGGCGGTTGCGCTGTCGAACATCGACCCGGTGATCGCGCTGATCAAGGCT TCGCCGACGCCGTCGGAAGCCAAGGAAGCGCTGATCAAGATGCCGTGGGAATCCAGCGCCGTTGTGGCGATGGTTGAACGCGCTGGCGCCGACTCCTGCC GTCCCGAGACCCTCGACCCGCAATACGGTCTGCGTGACGGCAAGTACTTCCTGTCGCCGGAGCAGGCCCAGGCCATCCTCGAGTTGCGCCTGCACCGCCT CACCGGCCTCGAGCACGAGAAGCTGCTGGCCGAGTACCAGGAGATCCTCAACCAGATCGGCGAGCTGATCCGCATCCTCAACAGCGCCGTGCGCCTGATG GAAGTGATCCGCGAAGAGCTGGAAGTGATCCGCGCCGAATACGGCGATGTGCGCCGCACCGAAATCCTCGATGCCCGCCTCGACCTGACCCTGGGCGACA TGATTCCGGAAGAAGACCGCGTGGTGACCATCTCCCACGGCGGCTATGCCAAGACCCAGCCGCTGGCGGCTTACCAGGCCCAGCGTCGTGGCGGTAAAGG CAAATCGGCTACTGGCGTGAAGGATGAGGACTACATCGCTCACCTGCTGGTCGCCAACAGCCACACCACGCTGCTGCTGTTCTCCAGCAAGGGCAAGGTG TACTGGCTCAAAACCTACGAAATCCCGGAAGCCTCCCGCGCTGCCCGTGGTCGTCCGCTGGTCAACCTGCTGCCGCTGGACAGTGATGAATACATCACCA CCATGTTGCCGGTCGACGACTATACCGAAGGTCACTTCATTTTCATGGCGACCGCCAAAGGCACCGTCAAGAAGACCCCGCTGGAATCCTTCAGCCGTCA GCGCAGCGTCGGCCTGATCGCCCTGGAGCTGGATGAAGGTGACGTACTGATCTCCGCTGCCATTACTGATGGCGCGCGTGAAGTGATGCTGTTCTCCGAT GGCGGCAAGGTGACGCGCTTCAAGGAATCCGACGTGCGTGCCATGGGCCGTACCGCCCGTGGTGTGCGTGGCATGCGTCTGCCGGAAGGGCAGAAGCTGA TTTCGATGCTGATCCCGGAAGAAGGTAGCCAGATCCTCACCGCATCCGCGCGTGGTTACGGCAAGCGCACGGCCATCAGCGAGTTCCCCGAGTACAAGCG TGGCGGCCAGGGCGTGATCGCCATGGTCAGCAACGACCGCAACGGCCGTCTGGTTGGCGCGGTGCAGGTGCTCGACGGCGAGGAAATCATGCTGATTTCC GACCAGGGCACACTGGTGCGGACTCGTGTGGCCGAAGTCTCGAGCCTGGGCCGTAACACCCAGGGCGTAACCTTGATCAAGCTGGCCAAGGACGAGAAGC TGGTAGGTCTTGAGCGCGTGCAGGAACCGTCGGAAATTGAAGGCGAAGAGCTGGAAGGAGAAGAGTTTGACGGTGAGGTGATCGCAACCGGCGATGACAA CATCGACGAGCCAACCCTTGATGCTGCCGCAGACGAAGAAGAACCGCAGGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGACATACAGGGGGCGGATGAAGATTCGCCCCCTTGTTGTTTGTGTCCCCTTTGAAATACATGTCCTTGGTCTGGCTTCGATCCCTGTGGGAGCTGGC TTGCCTGCGATAGCATCACCTCGGTATCACTGCAGCTACCGCGGTGCCTGTATCGCAGGCAAGCCAGCTCCCACAAGGGCTCGCTCCAGCTCAAGGCCGT TGCCGAACATGATTGCAGCCCCAACCAGATCAGAGTGAGATTGGATGTGAGCAAGAGAGCCTATAACTTCTGTGCCGGTCCCGCGGCGCTTCCTGAAGCA GTCCTGCAACGCGCGCAGGGTGAACTCCTCGACTGGCATGGAAAAGGCCTCTCCGTGATGGAAATGAGCCATCGCAGCGATGAGTTCGTCTCCATCGCCA CCAAGGCCGAGCAGGACCTGCGCGACCTGCTGAACATCCCTTCAAACTACAAGGTGCTGTTCCTGCAGGGCGGCGCCAGCCAGCAGTTTGCCCAGATCCC
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| Amino Acid Sequence |
>DNA gyrase subunit A
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY LLVDGQGNFGSVDGDNAAAMRYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALIDN PELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRIYMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRREVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKA SPTPSEAKEALIKMPWESSAVVAMVERAGADSCRPETLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQEILNQIGELIRILNSAVRLM EVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEDRVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVDDYTEGHFIFMATAKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGAREVMLFSD GGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNDRNGRLVGAVQVLDGEEIMLIS DQGTLVRTRVAEVSSLGRNTQGVTLIKLAKDEKLVGLERVQEPSEIEGEELEGEEFDGEVIATGDDNIDEPTLDAAADEEEPQE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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