Pseudomonas aeruginosa AZPAE14988, NT03_RS05470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14988 AZPAE14988_contig_4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGGTACTGGAAAGCCGCATCACCGGCAACGTCATCGAACAGACTCGCTTGCAGAATGCCGCCGAGTCCGGACTCCGCGAAGGCGAGCGGCGCTTCGTCA ACACCCTGCGTCCGCCGGAGCCCGGCACCGGTTGTAGGGCCGACAACGTGGCCCGTCCCTGCCTGCTGGACCTCGCCGCGCTGAACCTGAAGCTGGCGGA CACCCACCAGAATCCGGTCGGCGTGCTGAAGGGCATCGCCAATACCTGGATGAGTTACCGCGGCAGCGACATCACCAGCGCGACCACCGCGGGCACGCTC TACAGCGTGCAGTGGAACAACCTGCCCATTCCCTCGGGCGGCCAGGTCAACGAAGCGGAAAGCCCCGAATACGGCAACCTGATGCGCGGCATCGGCACCT TCTACTACGAGACCAATAGCGTCGCGCGCAACCAGACCAACAGCGAAACCGTCCTGCAGACCGTTCTCGCCCGTCTCTATACCAACTGATCGAGCCTCGC
DNA Sequence for Gene
>NT03_RS05470
ATGAAATCGGCACTCCACCAGATCGGCAAGACCTCGCTGGCAGCCGCGCTCAGCGGCGCCGTCCTGCTCTCCGCCCAGACCACCCACGCCGCCGCCCTGT CGGTCAGCCAGCAGCCGCTGATGCTGATTCAGGGCGTCGCCCCGAACATGCTGGTGACTCTCGACGACTCGGGCAGTATGGCGTTCGCCTATGCGCCAGA CAGCATTTCCAGATATGGGAACGATACGTTCTTCGCGTCGAACAGCTTCAACCCGATGTACTACGACCCGAATACGCGGTACAAACTGCCGAAGAAAGTA ACCCTCTCCAACGGCCAGATTCAGGTCCAAGACTATCCGAAGCCGAGTTTCACCGCAGCGTGGCGCAATGGATTCACCCAACAGGGCCAAGTGGATCTGT CCCGCTACTACCGGCCAACTATTTCCTACAGTGGTGGCTCGAGTGCGGGCAGCGAGTCCAGCATGCACAGCTCTCGACTCGCGTTCTACTACCAATACTC GGGCTCCGGTTGCTCCTCGACCAACGAATCCTGTTACAAGCGTGTAGATATTGTCGGAGCAGACCAGCAACAGAACTTTGCCAACTGGTATTCCTTCTAC CGTACCCGCGCCCTGGCTACCCAGACCGCCGCCAACCTAGCCTTTTATAGTCTGCCGGAAAATGCGCGGATCAGTTGGCAGTTGCTGAACAACTCCTACT GCCAGATCGGCAGCGGTTCCAGCAACTGCTACAACAACTACCTGAGAGACTTCACTGGTCAACATCGGGTGAACTTCTTCAACTGGCTGGAAAATCTTTC GGTCAATGGTGGTACGCCACTGCGCCAGGCGATGACCCGGGCAGGCGAGTTTCTCAAGAAGACTGGCGTCAACGGTCCCTATGCTTATCGCCCAGGGACT CAGACCGCGCCCGAGTACAGCTGCCGGGGCAGCTATCATATCCTGATGACCGACGGTCTCTGGAACAACGACTCGGCCAGCGTAGGCAATGCCGACAGCA CCGCTCGTAACCTCCCCGATGGGAAGAGCTATAGCAGCCAGACACCCTACAGGGACGGTACGTCCAATACCCTGGCCGACCAGGCCTTCCATTACTGGGC CACCGATGCCCGGCCGGATATCGACGACAACATCAAGCCGTACATTCCCTACCCGGACCAGGCCAATCCCTCGGCGGAGTACTGGAATCCGCGCAACGAT CCGGCGACCTGGCAACACATGGTGACCTACACCCTGGGCCTGGGCCTGACCACCAGCCTCACCAGTCCGAGATGGGAAGGCTCCACCTTTTCCGGTGGCT ACAACGATATCGTGGCTGGCAACCTGAGCTGGCCCCGCGCGTCGAACAACGACCCCAACAACGTCTACGATCTGTGGCACGCCGCAGTGAACTCCCGGGG CGAGTTCTTCAGCGCCGACTCGCCGGACCAACTGGTCGCGGCCTTCCAGGACATCCTCAACCGAATTTCGGGCAAGGACCTGCCGGCATCCCGCCCCGCC ATCAGCTCGTCCCTGCAGGAAGACGACACTGGCGACAAGCTGACCCGCTTCGCCTACCAGACCAGCTTCGCCAGCGACAAGAACTGGGCTGGCGACCTGA CCCGCTACAGCCTGACCACCCAGGACAAGGCCACCGTGCAGACCAAGCTGTGGAGCGCGCAGAGCATCCTCGACGCGATGCCCAACGGTGGAGCTGGCCG CAAGATCATGATGGCCGGATCCGGTACCTCGGGCCTCAAGGAGTTCACCTGGGGCAGCCTCAGCGCCGACCAGAAGCGGCAGTTGAACCGCGATCCGGAC CGCAACGATGTCGCCGACACCAAGGGCCAGGACCGCGTGGCCTTCCTGCGCGGCGATCGCAGCAAGGAGAACAGCGACAACTTCCGCACCCGCAACTCGA TCCTCGGCGATATCATCAACTCCTCGCCGGCGACGGTCGGCAAGGCCCAGTACCTGACCTACCTGGCCCAGCCGATCGAGCCCAGCGGCAACTACTCCAC GTTCGCAGAAGCACAGAAAACCCGTGCCCCGCGGGTATACGTCGGCGCCAACGACGGCATGCTGCACGGTTTCGATACCGACGGTAACGAGACCTTCGCC TTCATCCCAAGCGCGGTCTTCGAGAAGCTCCACAAGTTGACCGCCCGCGGCTACCAGGGCGGCGCCCACCAGTTCTACGTCGACGGCTCGCCGGTGGTCG CCGACGCCTTCTTCGGCGGCGCCTGGCATACCGTGCTGATCGGCAGCCTGCGTGCCGGCGGCAAGGGCCTGTTCGCCCTCGACGTGACCGACCCCGCCAA CATCAAGCTCCTCTGGGAAATCGGCGTGGACCAGGAGCCCGACCTGGGCTACAGCTTCCCCAAACCCACGGTCGCCCGGCTGCACAACGGCAAGTGGGCC GTGGTTACCGGAAACGGTTATTCCAGCCTGAACGACAAGGCCGCGCTGCTGATCATCGACCTGGAAACCGGGGCCATCACCCGCAAACTGGAAGTCACCG GCAGGACCGGCGTACCTAACGGTCTATCCAGCCCTCGCCTGGCAGACAACAACAGCGACGGCGTAGCCGACTACGCCTACGCCGGCGACCTGCAAGGCAA CCTCTGGCGCTTCGACCTGATCGCCGGCAAGGTCAACCAGGACGATCCGTTCAGCCGAGCCAACGACGGCCCGGCGGTGGCCTCGAGCTTCAGGGTGTCT TTCGGTGGCCAACCGCTCTATTCGGCGGTCGACTCCGCCGGCGCGGCGCAGGCGATCACCGCCGCGCCCTCGCTGGTTCGCCATCCGACACGCAAGGGCT ACATCGTGATCTTCGGCACCGGCAAGTATTTCGAGAACGCCGACGCCCGGGCCGATACCAGCCGCGCCCAGACGCTCTACGGCATCTGGGACCAGCAGAC CAAGGGCGAAGCCGCGGGCAGCACACCCCGACTGACGCGCGGCAACCTGCAGCAGCAGACCCTGGACCTGCAGGCCGACTCGACCTTCGCCTCGACCGCT CGCACCATTCGCATCGCCAGTCAGAACCCGGTCAACTGGCTGAACAATGACGGCAGCACCAAGCAGTCCGGCTGGTATCTGGACTTCATGGTCAACGGCA CCCTGAAGGGCGAGATGCTGATCGAGGACATGATCGCCATCGGCCAGGTGGTGCTGCTGCAAACCATCACCCCGAACGATGACCCCTGTGCCGACGGCGC CAGCAACTGGACCTATGGCCTCGATCCCTATACCGGCGGTCGCACCAGCTTCACCGTGTTCGACCTGGCACGCCAGGGCGTCGTGGACTCGAAATCCGAC TACAGCTACAACAAGCAGAACGTCGCGGTATCCGGTACCGAGCAGAAAGGCCTGGGAGGCTTGACGCTGAGCACCAACGAACAGGGCAATCCGGAAGTCT GCTCCTCGGGCGAATGCCTGACCGTGAACCCCGGTCCGAACACCCGTGGCCGCCAGAACTGGCGCCCCATCGAAGGAAAGAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TATGAAAGTGCTGCCTATGCTGCTGGCCCTGGCCGTTCCCGGCCTCTGCTGGGCCGAAGAGCCCCAGACCTTCGAAGGCGCTGGCGTGGTCTTCGAAGTC CAGGTCGAGAAGAACCTGGTGGACATCGACCACCGGCTCTACCGCCTTCCCAACAGCACCGTCAGGAACGGCATGCCCAGCCTGTTCCAGGTCAAGCCGG GCTCCGTGGTGTCCTACTCTGGCACCGTCAGCCAGCCGTGGTCCACCATCACCGATATCTACATTCACAAACAGATGAGCGAACAGGAGCTGGCCGAGAT GATCGAGAAAGAACAGCCCCGCCAGGACGGGGAGGAGCAGCCCCGATGAGGACAAGACAGAAGGGCTTCACGTTGCTGGAAATGGTGGTGGTAGTGGCGG TGATCGGCATCCTCCTCGGCATCGCCATTCCCAGTTACCAGAACTACGTGATCCGCTCCAACCGCACCGAGGGCCAGGCCCTGCTCTCGGACGCAGCCGC
Amino Acid Sequence
>type 4 fimbrial biogenesis protein PilY1
MKSALHQIGKTSLAAALSGAVLLSAQTTHAAALSVSQQPLMLIQGVAPNMLVTLDDSGSMAFAYAPDSISRYGNDTFFASNSFNPMYYDPNTRYKLPKKV TLSNGQIQVQDYPKPSFTAAWRNGFTQQGQVDLSRYYRPTISYSGGSSAGSESSMHSSRLAFYYQYSGSGCSSTNESCYKRVDIVGADQQQNFANWYSFY RTRALATQTAANLAFYSLPENARISWQLLNNSYCQIGSGSSNCYNNYLRDFTGQHRVNFFNWLENLSVNGGTPLRQAMTRAGEFLKKTGVNGPYAYRPGT QTAPEYSCRGSYHILMTDGLWNNDSASVGNADSTARNLPDGKSYSSQTPYRDGTSNTLADQAFHYWATDARPDIDDNIKPYIPYPDQANPSAEYWNPRND PATWQHMVTYTLGLGLTTSLTSPRWEGSTFSGGYNDIVAGNLSWPRASNNDPNNVYDLWHAAVNSRGEFFSADSPDQLVAAFQDILNRISGKDLPASRPA ISSSLQEDDTGDKLTRFAYQTSFASDKNWAGDLTRYSLTTQDKATVQTKLWSAQSILDAMPNGGAGRKIMMAGSGTSGLKEFTWGSLSADQKRQLNRDPD RNDVADTKGQDRVAFLRGDRSKENSDNFRTRNSILGDIINSSPATVGKAQYLTYLAQPIEPSGNYSTFAEAQKTRAPRVYVGANDGMLHGFDTDGNETFA FIPSAVFEKLHKLTARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRAGGKGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWA VVTGNGYSSLNDKAALLIIDLETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAGKVNQDDPFSRANDGPAVASSFRVS FGGQPLYSAVDSAGAAQAITAAPSLVRHPTRKGYIVIFGTGKYFENADARADTSRAQTLYGIWDQQTKGEAAGSTPRLTRGNLQQQTLDLQADSTFASTA RTIRIASQNPVNWLNNDGSTKQSGWYLDFMVNGTLKGEMLIEDMIAIGQVVLLQTITPNDDPCADGASNWTYGLDPYTGGRTSFTVFDLARQGVVDSKSD YSYNKQNVAVSGTEQKGLGGLTLSTNEQGNPEVCSSGECLTVNPGPNTRGRQNWRPIEGKN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site