Pseudomonas aeruginosa AZPAE14988, NT03_RS28685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14988 AZPAE14988_contig_31, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCGGCAGTGCATCGGCGGCTTGCAGCAGAGCCTGCGGACCCGCAGCGAACTGAAGAACGAACTGCGCCTGTCGCTGAGCACGTTGCGCGATACCGGCA AGAATCCCTTGCGCTTCAGCGCCGATGCCGGCGAGGCGCTGGGTCATCTGCTACGGGATGGCAAGCCTGGCCAGTTGAGTGGCGAACAGGCCGTCGCACG CAGTTTCCGCGACCTCCAGGCGCACCAGGTGGCGCTGCTCGGCGCCAGCCGGGCGGCGGTGCGCGCGACCCTCGAGCATTTCTCGCCGCAGCAGCTGACC CTGCGTTTCGAGCGCGACGGCCGCCGGCCGTTGCTGGCCACCTCGGGCAGCCGCTGGCGTGCCTATGGTCGCTACCACCAGTCGCTATGCCAGGACGACG ACTGGAGCGAGCGCCTGCTGGCACGTGATTTCGCCCAGGCCTACGAAGAGCAGGTTCGCCTGATTTCCACCCTCTACACCGAGCACCAAGGATGATCGCC
DNA Sequence for Gene
>NT03_RS28685
ATGTCTCGTCGCCCGATTCCGCCAGCCAGGGCGCTGGCCATGCTCGCCGTCCTGGCGCTGCTGGCCGGCTGTTCCACGCTGTCGCCGTATTCCAGACTGA CCAAGCTCGACCTCGCCCTGAGCGCCGGCGAGCGGGTCAATCCCGACCTCAATGGCCGGCCGTCGCCGGTGGTAGTGCGGCTGTTCGAGCTGAAGCACCC GGTGGCGTTCGAGAACGCCGACTTCTTCAGCCTCTACGAACGTCCCAAGGAGACCCTGGACCCCGACCTGGTGACCAGCGAGGAGCTGGAGCTGCGGCCC GGCGAGCGGGTCGAACTCAAACTCAGCGTGGAGGAGGGGAGCCGCTACGTGGGCGTGCTCGCCGCCTACCGCGATCTCGGCGAGGCAAGCTGGCGCTACG TGGTGCCGGTCACGGCGAAAGAGCTGACCCGGGTAGAGCTGAAGCTGGGTCGGAAGGGCATCCTGAATGCCGGCGAACTGCTCGGCAAGGCGGGTGACGC GCGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGTGCACAAGATCGTCTGGCAGGAAGGCATGCTGCTGCGCCCGCAGCATCTGCAACACAACGACCGCTACTACGACAACCAGATGAAGGCCCGGACCCA GTTGCTGGGCAGCTACAACTGGGGCTTCCTCGCCCTGGAGCTGGACCGCCAGTTCCTCAACATGGGCAAGCTGGTGATCAGCCAGGCCTCCGGCGTACTG CCCGACGGCAGCCTGTTCGAACTCGGCGGCAACACCGAGCCGCTCGCCCTCGACGTGCCGCCCAATACCTCGAACGTGCCGATCTACCTGGCCCTGCCGC TGGTCACCGGTAACCACATCGAGGCGCGCCGGCCGGAGCAGGCCGAGGTCCTGGCGCGCTATACCGCCTACGATCTGGAGGTGGCGGACTCCAACGCCGG CGAGGATTCCATGGTGCAGGTCAGCTGCGCGCGGCCGGATTTTCGCCTGCTGCTCGGCGAGCAGCAGAGCGACCAGGCCTACGTCAAACTGAAGGTGGCG
Amino Acid Sequence
>type VI secretion protein
MSRRPIPPARALAMLAVLALLAGCSTLSPYSRLTKLDLALSAGERVNPDLNGRPSPVVVRLFELKHPVAFENADFFSLYERPKETLDPDLVTSEELELRP GERVELKLSVEEGSRYVGVLAAYRDLGEASWRYVVPVTAKELTRVELKLGRKGILNAGELLGKAGDAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site