Pseudomonas aeruginosa AZPAE14988, NT03_RS16155

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14988 AZPAE14988_contig_15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATCCATCCGGAATGCGAGTGGGCGGACATAGGGTTCTCCTCGTCGTGGGAAACCCATGCTGGCCTGTCTTCGAGTATCCCGATATCGACCGGATGGTTG ATAGGTCGATATGCCACGGAAATAGCACGGAGCGGCGAAGGGAAAGTTATCGAAGATGAAGTATTAGATGGGTTTTCGTTTCTTCTTTTTTGGTTTTTTA GTTAATGGCTTCCTGTTCTTCTATAAGTATTTTCTGAATGTATTCTTATGTACCTATTGGCTGTTATCGGAAATGGACTACATATGTTTTCGTATGATTA TTATTTTTAAATCCTGTCTTTCTTTCTAGTATTTGGGTCTGCGTTTATCAGGGCGCAATCTTCGGCTGTCGCGTAATGGTCGGAGGCGCTCTAGGCGGCC GTCCCGGTTGCGCGCAAAGGCTTGGCTACCTTGGCCGGTTCGTACTGCATCGGCTCTCCAGGGAGCAGCCAGGATGTTCCACAACTCCAAAGGAAATCAG
DNA Sequence for Gene
>NT03_RS16155
ATGAACAAGTTCAAACGTGCAATTCTTGCGCCCCTCGTTGCGTCGGGCACCCTTCTCGCGCTGATGTCCCCCGCGGCCCATGCGGTCGATGGGATCGTCA ACTTCTCGGGCAACATCACCGACGTCGCGTGCGATATCAACGGCCAGGCGCCGGGTGCGGGCAACGTCACCAACGTCGACCTGGGTATCGTGGCGCCGAC CCATTTCACCGCCGTCGGAACCAACTCCACTTTCCAGGAGTTCGACCTGGTCCTCTCCGGTGCCGGCTGCACCAATGACAAGAAGGTTTCCATCGCCTTC GACCCGGTCACCAACGTCGACCGCATCAGCGGCAACCTGATGCTGATGGGGCCGTCGGAAGCCAAGGGCGTGCAGATCCAGATCTTCAACAATTCGGCGG CCAACACCACGAAGATCCCGCTGGGCTCGGTCGAGGCCGCCCCGCAGAAGGCAACCGTCCTGAAGAACACGGCGACCCTGAAGTACAAGGCCTCCTATGT GTCCACCGAGAAGACCGTGACCGCGGGTACCGGCCTGTCCCATATCCGCTACCTCCTGGCGTACGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGCGGTCGACGGACGAAGAGGTGAGGCCATGGCGCCGCTAATGCATCGTTTTCATTCTTTCGTGGCGGCAAGCGCCGTGGCCATCGCCCTGTGCGCCG GAACGGCTCATGCCGGGCTGATCGCACAGGGCACTCGCGTCGTCTTTCCGGCCAGCGAGCGCGAGGTCACCTTGCGGGTCAGCAATACGTCCGGCACTCC CGTGCTGGCGCAAGCCTGGATCGACGATGGCCGGCAGGACGTTCCCCCCGAGGAACTGCAGGTCCCCTTCAGCGTCACGCCGGCCGTGACGCGAGTGGAC CCCAATGGCGGCGCCGTATTGCGCATCGCCTACCTGAAGGCCCCGTTGCCGACGGATCGCGAATCGCTGTTCTGGCTGAATATCCTGGAAGTTCCGCCCA GGGACGAAGACGAAAACAATGCATTGCAGTTTTCCTTTCGTTCGCGCTTCAAACTCTTCTTTCGACCCAGCCAGTTGAAGAGTGTCGATTCGGCTGCCGG
Amino Acid Sequence
>fimbrial protein
MNKFKRAILAPLVASGTLLALMSPAAHAVDGIVNFSGNITDVACDINGQAPGAGNVTNVDLGIVAPTHFTAVGTNSTFQEFDLVLSGAGCTNDKKVSIAF DPVTNVDRISGNLMLMGPSEAKGVQIQIFNNSAANTTKIPLGSVEAAPQKATVLKNTATLKYKASYVSTEKTVTAGTGLSHIRYLLAYE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site