Strain | Pseudomonas aeruginosa strain AZPAE14988 AZPAE14988_contig_13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGCCGGCCGACGCCTCCCTGCACGACGCTGTGAGCCATCTCTACCAGGACCACCATGGCTGGCTGCAAGGCTGGTTGCGGCGACGCCTGGGCTGCGCGG AAAACGCCGCCGACCTGGCCCAGGACACCTTCGCCCGCCTGCTCGCCTCGCGCCGGGTACTGGATGCGCGCGAACCGCGCGCCTACCTGACCACCGTCGC CAAGGGACTGATGATCAACTGGTTCCAGCGCCAGTCGCTGGAGCGCGCCTACCTCGATGCCCTGGCCAACCTCCCGGAAGACCTCGCGCCGCCGCCGGAA CAGCGGTTGATGGTGCTGGAAACCCTGCATGAAGTAGACGCCCTGCTCGGCAGCCTGCCGGATAGGGTCCGCCAGGCGTTTCTCCTGGCGCAGATCGAAG GCCTGAAGTACGAAGCCATCGCCGAGCGCCTGGGCGTGTCCCTGGGCTCGGTCAAGCGCTACATGCAGCAGGCCTTCCGCCAGTGCCTGGAGCTGATGGA
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DNA Sequence for Gene |
>NT03_RS14655
ATGAATTCCGCGGGCGAAGGCCGGATTCCCTCGCCGATCCTCGACGAGGCCGCCGAGTGGCTGGTGCGCCTGCAGGACAGCGGCTGCACCGACGACACGC GCCAGGCGTGCGCCCAGTGGCGGCAGCGCAGCCCACAGCACGCCCATGCCTGGGAGCGCGCCGAGCGCCTGCTGCAATGCCTCGGCCGACTGCCGCCGGC GCTGGCCCTGCCGACCCTCGGCCGCGAGCGCGGGCTGGACCGGCGGCGCGCGATCAAGCACCTCGCGCTGGTCCTCGGCGGCGCCTCGCTGGGGCTCGCC ACCTGGCAGGCCGAGCCGTTGCGCGACTGGCTGGCCGACCAGCGCACCGGCGTCGGCGAACAGCGCCGCTTGACCCTGCCCGACGGCAGCCTGCTGACCC TGAACACCGACAGCGCCGTGGACCTCGCCTTCGACGCCAGCCAGCGGCTGGTACGCCTGCTGCGCGGCGAGATCTTCGTCGATAGCCGCGCCGACCCGCG TCCGTTCCGCGTCGCCACCGCCGAAGCGCGGCTGCATGCCGGTGCCGCCCGCTTCAACGTACGCCAGGAGATGGCCGCGACCCGGGTCGCGGTACTCGCC GGGCGGGTCGAACTGAGCCCGCTCCACGGACGCGGGCGCTGGCTGGAAAGCGGCGAGTCGGTGCGCCTGGGCGCCGACGGCGAAGCGCGCCGGCTGGCCT TCGACGGCCTGCCGGACGCCTGGACCCGCGGCATGCTGATGGCCGACCGGATGCCGCTGGCCGAGGTGCTCGCCGAACTCGCCCGCTACCGTCGCGGCGT ACTGCGCTGCGACCCGCAACTGGCCAGGCTGGCGGTGTCGGGCGCCTATCCGCTGCTGGACCTGCGGCGCACGCTGGGCATGCTGCAGGCCACCTATCCG CTGAAGGTGCGCGGGGTGACCGACTACTGGATCAGCCTGGTGCCGGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGCGCGGCCGCCATCCCCGTGGCAAGCGCCCCTCGCGTCCACCCCGGCAGGCCGTCCGCCGTTGCGCCGGAACAGGCGTTGCCATCGACATACCGTGCT CCGCAGAAAAATAACCGCCTCGACCTGAGACCTTTTTCCTTCTCGGCTGGCAAGTAGAGGAATCCGCCCCGACCCAAGGTCCGCAGAGACCACGAGGAAC CCTGTACATGCCCGTACGCACGCTTCGCCCCCGTTCGCTGTCCCTGGCCATCCACGCCGCCGCCATGACCCTCGCCCTCGCCGGCGCGGCCCCCGCCCTG CTTGCCGCCGAGGCGCCCGCCGCCAGCTCGGCGCGCAGCTATGACATCGCCCCCGGCCCGCTCGGTCGCACCCTGTCGGCCTTCGCCAGCGACAACGGGG TATCCCTGGCGTTCGACCCGGTTCTCGCCGAGGGTCGCCGCAGCGCCGCCCTGCGCGGCCGCTACGCGCCGGTCGAGGCGCTGCACCGCCTGCTGCTGGG
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Amino Acid Sequence |
>iron dicitrate transporter FecR
MNSAGEGRIPSPILDEAAEWLVRLQDSGCTDDTRQACAQWRQRSPQHAHAWERAERLLQCLGRLPPALALPTLGRERGLDRRRAIKHLALVLGGASLGLA TWQAEPLRDWLADQRTGVGEQRRLTLPDGSLLTLNTDSAVDLAFDASQRLVRLLRGEIFVDSRADPRPFRVATAEARLHAGAARFNVRQEMAATRVAVLA GRVELSPLHGRGRWLESGESVRLGADGEARRLAFDGLPDAWTRGMLMADRMPLAEVLAELARYRRGVLRCDPQLARLAVSGAYPLLDLRRTLGMLQATYP LKVRGVTDYWISLVPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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