Strain | Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTCGCCCAGGTCAACGAGCGGGTTCGCCAGGAGGCCGGCCTGCGTGGCGTCAGCGTGATGGGCAGCACCCTGGTACTGCTCGCCGCGCGCGGCAACCAG GCGAGCTGCCTGTGGGCCGGCGACAGCCGCCTGTACCGCCTGCGCGGCGGCGTGCTGGAAGCCATCTCGCGGGACCACAGCTACGTCCAGGAGCTGCTCG ACAACGCATTGATCAGCGAGGAAGAGGCGCGCCACCATCCGCGCGCCAACGTGGTCACCCGCGCGGTCGGCGTGCACGAGCAACTGGAACTGTCGGAAGC CGCGCTGCACGTGCTGCCCGGCGACAGCTTCCTGCTCTGCAGCGACGGCCTCAACAAGACCGCCGACGACAGCGAACTGCGCGACGTGCTCAGCCACAGC GATCCCTATGCGGTGGTCCGCAGCCTGGTCCACCTGGGCCTGACCCGCGGCGCCCCGGACAACATCACGGCCCTGGTGGTCAGGGCCTTCTGAGACGGAC
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DNA Sequence for Gene |
>NT04_RS10675
ATGGACATAGAACTTCCGGGATTCGACATCGAACGCGAGCTGGGCGAAGGCGCCATGGCCACGGTCTACCTGGCCACCCAGCGCTCGCTGCAGCGCAAGG TGGCGCTGAAGGTGATGGCCGCGGCGCTGGCCGCCGACCCGAGCTTCGCCGAACGCTTCCTGCGCGAAGGTCGGACCCTGGCGCGGCTGTCGCACCCGAA CACGGTGACCATCCACGACATCGGCAACGTCGGCAGTTGCTACTACATGGCCATGGAATACCTGCCCAACGGCACGCTCAAGGAGCGCATCCAGCAGGGC CTCGATCCCGAGCAGGGCCTGGCCTACGTACGGCAGGTGGCCGCCGCGCTCGGCTACGCGCACTCCCAGGGCCTGGTGCATCGCGACGTGAAGCCGGCCA ACATCCTGTTCCGCGCCGACGGCACCGCGGTGCTCTCGGACTTCGGCATCGCCAAGTCGATCGAGGACAATACCCAGTTCACCCAGGTCGGCTTCGCCGT CGGCACCCCCAGCTACATGAGCCCGGAGCAGGCCCGCGGGCAGGAGATCGACGGCCGCGCCGACCTCTACGCGCTGGGCGTGGTGCTCTACGAGATCCTC ACCGGCAAGCTGCCCTACAACGGCAAGGACTCGCTCTCCACCGCCCTGGCCCACCTCACCGAGCCGCTGCCGGAACTGCCGATCGAGCAGGGCCGCTACC AGGACATCCTGCGCCAGTTGCTGGCCAAGGACCCGGCCGAGCGCTTCCCCACCGCCGGCGCGTTGATCGCCGCCCTCGACCGCCTGGCGCCGAGCGCCCT GGAAGCCACCCAGATCCGTCCGCTGGCGACGCCGCAGGGCTCGCCGCGAGCGAGCAACCCGCCGCCGGCCGAACCCGCGCCCCTGCCGCCCGCCGACCTC GGCGGCCTGCAACCGGTGTCGATCCAGTTGCCGCCGGTCACGCCCAGCGCCGGCAGCGCCACGCCGCCTCCGCCTCCGCCGTCGCAAGCGGCGAAACCGC CATCGCCCCCGCCGCCTCCGTTGCCGCCGGCGAAGCCACGTGCCGGCGGCAGCCGCACGCCGTTGATCGTCGCCGCCGCGGCCGCCGTGCTCCTGGCGAT CGGCGGCGGCGCCTGGTGGCTGCTGGGCTCGGGCGACGCGCCGAGCGCTGCCGATCCAGCGCCGCTGGGACAGACGCCGGCGGACAAGCCGCAGCAGCAG ACCCCGGTGGCCGATGCCGAACAGGACGGCGGCGAGCGTCCGCTGCTGATGCCAGGCAAGAAGACGCTGTTCCAGCGCGTCCTGACCAAACCCGGCGCGG CCATCTCCGCCGAGGCTGGCGGCCCGCCCCGGGCCGGCGCGGTGCCGGCCTTCTCGGTGCTCTACGTGTACGCCCGCAAGCAGGTCGGCGGCAGCCCCTG GCTGCGCGTCGGCGCCTCCAGCAACGGCGAGGGCGACGGCTGGCTGCCGGCCAGCGCGGTGAGCGACTGGAAGCAGAGCCTGGTGCTGAAGTTCACCGAA CGCTCCGGCCGCGCGCCGGTGATGTTCCTCAACAGCGCCGAGCAGGTCGAACGCCTGCTCGGCGATACCCGCGCGGCGCGCGACACCCTGACCCAGGCGG TGGACCACAAGGGCGATCCGCAGGTGGTCGCGGTCGAGCCCAACGACCGGGCGATCCCCCAGGACCAGTTCTACCTGCTGCCGATCTTCGACTCCAAGGA GAGCTTCGACGCCGACGGCCAGCCGGCGCAGTTGCTGGAGGTCGCTTCGATCGACCCCGGCGGCAGCGCCACGGCACCCCAGGCGCCGGGCCAGGCCGGG CGGGGCGGCGCCAGCGGCGCGGCGAGCGACACCTTCCGCACCGGCATCGTCCTGGTGGTGGACACCTCGGTGTCGATGCAGCCCTACATCGACCGCGTGC GCGAGGTGATCGACGGCCTGCAGCGGCAGATCGGCGAGCGCGGCGACCTGGACAAGGTCAGCTTCGGCCTGGTCGGCTTCCGCAACAACACCGACAAGAC CCCCGGCCTGGAATACGTCAGCAAGACCCTGGTGCCGCTGCAACCGGGCAACGACGCGCAGCGCTTCGCCGAGTTGAGCAGCCAGGTGCGCGCCACCGAC GTCTCCAGCCACTCGTTCAACGAAGACGCCTTCGCCGGGATCATGCAGGCGGTCGACGAAATGGACTGGTCGCCCTACGCCGGGCGCGTGGTGCTGCTGG TCACCGACGCCGGCGCGCTGCGCAAGAACGACCCGCTCGGGCGCACCCAGATGAACGAGGCCGAGGTCCGCCAGGCGGCGCTGCGCAAGGGCGTGAAGAT CTATGCGCTGCACCTGCGCACCCCGGCCGGGAAGAACAACCACGGCTACGCCGAGCAGCAGTACCGCAGCCTCACCGCCGACGCCAACCCGAAGATCGCC GACCTCTACATCCCGGTGGCCGGCGGCGAGGTGAACGCCTTCGGCAACACGGTGAAGGAGATCGGCACGGTGTTCGCCGACCTGGTCCACGACGCCGGCA ACCGCAAGCCGCAGGCGCCGCGCTTCGACGCCGCGCCAAGCGTGGCGAGCAAGTCGGCGGCCATCGGCTACGCCATGCAGATGGAATTCCTCGGTCGCCG CGACCCGGTGCGCGCGCCGCAGGTCGTCACCGCCTGGACCGCCGACCGTGACCTGACCAACCCGGCGCTGCCGGCGTTCCAGGTCTGCGTGCTGCTGAGC AAGCTGCAACTCAACGAACTGCAACAGTCGCTGAAACTGATCGTCGACGCGGCCAAGCGCACCCAGACCTCGCCCAAGGACTTCTTCCAGGAAATCGCCA GCGCCAGCGCCTACATGAGCCGCGACCCGGCGCAACTGGTGAAGGGCAGCAACCTGGCGCAGAGCGGCGTGCTCGGCGAATACCTGGAAGGCCTGCCGTA CCGCAGCAAGTCGCTGAACATGACCCAGGACCTCTGGCTGTCGCTGAGCGTCGCCGAGCAGCAGGACTTCATCGACGAACTGGAGTCGAAGATCCGCCTC TACGAAACCTTCCACAACGACGTCGCCAACTGGGTCCGGTTCGGCGACGCCGACGCCGGCGACGCGCTGTACCGCGTGCCGCTGTCGACGCTGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCTGCGCCTGCACGAGGTCGCCCGCAGCCACGGCGCCGGTCGCCAGCGCTACCGCCTGCGGGTGCCGGCGCTGGAATTGCGCGCGGGTCGCCAGCTGGC CATCGTCGGCCCCAGCGGCTGCGGCAAGAGCACCCTGCTCGACCTGCTGGCGCTGGCCCTGGCGCCGGACCCGGGCGGGCGCTTCGAATTCCTCGCCGGG GAACGCCCACAGGACATCGCCGCGCTCTGGCGCGACGGCCGCCAGGACCGCTTGGCGGCGCTGCGCCGGCAGCACTGCGGCTACGTGCTGCAAAGCGGCG GGTTGCTCGAGTTCCTCGATGTGCGGCGCAACATCGGACTGCCCTGCGCATTGCTCGGCGCCCCGTCCGCCGAGCGCGTGCAGGCGCTGGCCGAGCGGCT GGAAATCGGCGACCAGCTGGACAAGAAACCGGCGGCGCTGTCGGTCGGCCAGCGCCAGCGGGTCGCCATCGCCCGCGCCCTGGCGCATGCGCCGCGCCTG
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Amino Acid Sequence |
>serine/threonine protein kinase PpkA
MDIELPGFDIERELGEGAMATVYLATQRSLQRKVALKVMAAALAADPSFAERFLREGRTLARLSHPNTVTIHDIGNVGSCYYMAMEYLPNGTLKERIQQG LDPEQGLAYVRQVAAALGYAHSQGLVHRDVKPANILFRADGTAVLSDFGIAKSIEDNTQFTQVGFAVGTPSYMSPEQARGQEIDGRADLYALGVVLYEIL TGKLPYNGKDSLSTALAHLTEPLPELPIEQGRYQDILRQLLAKDPAERFPTAGALIAALDRLAPSALEATQIRPLATPQGSPRASNPPPAEPAPLPPADL GGLQPVSIQLPPVTPSAGSATPPPPPPSQAAKPPSPPPPPLPPAKPRAGGSRTPLIVAAAAAVLLAIGGGAWWLLGSGDAPSAADPAPLGQTPADKPQQQ TPVADAEQDGGERPLLMPGKKTLFQRVLTKPGAAISAEAGGPPRAGAVPAFSVLYVYARKQVGGSPWLRVGASSNGEGDGWLPASAVSDWKQSLVLKFTE RSGRAPVMFLNSAEQVERLLGDTRAARDTLTQAVDHKGDPQVVAVEPNDRAIPQDQFYLLPIFDSKESFDADGQPAQLLEVASIDPGGSATAPQAPGQAG RGGASGAASDTFRTGIVLVVDTSVSMQPYIDRVREVIDGLQRQIGERGDLDKVSFGLVGFRNNTDKTPGLEYVSKTLVPLQPGNDAQRFAELSSQVRATD VSSHSFNEDAFAGIMQAVDEMDWSPYAGRVVLLVTDAGALRKNDPLGRTQMNEAEVRQAALRKGVKIYALHLRTPAGKNNHGYAEQQYRSLTADANPKIA DLYIPVAGGEVNAFGNTVKEIGTVFADLVHDAGNRKPQAPRFDAAPSVASKSAAIGYAMQMEFLGRRDPVRAPQVVTAWTADRDLTNPALPAFQVCVLLS KLQLNELQQSLKLIVDAAKRTQTSPKDFFQEIASASAYMSRDPAQLVKGSNLAQSGVLGEYLEGLPYRSKSLNMTQDLWLSLSVAEQQDFIDELESKIRL YETFHNDVANWVRFGDADAGDALYRVPLSTLP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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