Pseudomonas aeruginosa AZPAE14989, NT04_RS10095

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGTCCTCCCACTGGTCGTGGGCGCGTACCCGGCGTACCTGTTCGGCGTGCGCAGGCGTTGCGCCTCCAGCACCGCGCCGAGATCGGCGACGGCCGCAGC CGAGTCCGCCGCCGGCGGCGGCGGGAGGTAGTCGGCCAGGCGCGGTGGGTGGGCCAGCGGATAGGGCGCGGCGGCGGTCTCCCCGAGACAAGACAGCGGT GCGAGCAGCGAAAGGCAGAGCAAGAGCGAAGGGCATAGGGTCTTGTTGTTCATGAAGCGTATTCCCTGAGGCGAGGTTGCATCGGGAGCCGAGGCTCCCA CCCACGGCCGTTGCGGATGACGGCCGACGCCACACTCTCCGTCGGTGACTTCCGAAATGCTTGACCCGGCCTGCCGTTGCACATGCCAGCCCCTGCCAAT GGCAGGCCCCGGCAAAAGCCGAGGCAGGGAAACACAAGCGGCCTGCGGAGCGACTTCCGAGACTGCGCCCACCTGGCACTCAGGTGGGAGAAAACAATAA
DNA Sequence for Gene
>NT04_RS10095
ATGCAAAATCTCAGACGCGCTGTATTCGCCGGCCTGGTCGCCGGCACGCTTTCCGAAGGGGCGGCCGCGACGGCCGGGGATGGGGGCTTCGTCGAGGACA GCGAACTGCAGTTCCTCGCCCGCACCTACTACTTCAACCGCGACTACCGCGACAGCCCGAACAACGCCGGGCGCAACCGCTTCAAGCCCAGGAGCGAGCG CAACGGCTACCGCGAGGAAACCACCCAGGGCCTGCGCCTCCAGTTCGCCTCCGGCTACACGCCGGGCAGCCTCGGCTTCGGCCTCGACGCCCATGCCATG CTCGGCCTGCAACTGGACAGCGGCGGCGGCCGCACCGGCACCGGCAACCTGCCGGTCGGCGCCGACGGCCATCCCGACCATCGCTACGGCAAGGTCGGCG GCGCCCTCAGGCTACGCCACGGCGAAACCCGCCTGAAGTACGGCCAGACCACCACCAGCGCGCCGGTGTTCGCCGCCAGCAGCAACCGCACGCTGGCCGG CATGGCCTACGGCCTGCTGCTGGAGGATCGCTCGTTCGACGGGCTGCTGCTCGAGGGCGGGCGCTTCACCGCCGCCTCCGGCCCCGGCGAATCCAAGGTC CGTGGCGACATCAGCACCGTCTACGGACGCCTCGGCGCCTATCCGGTGCGCCTCGACGCGGTCGGCTTCCTCGGCGGTCAATGGCAGGCCACGGAGCGGC TGCAACTGTCGCTCTACGCCTCGCGCTTCGACGACATCTGGCAGCAGGCCTATTTCGGCGCCAGCCATCGCCAGCCGCTGGGCGGGGAGCGCGCGCTGCG GGTCGACCTCGACGCCTACCGCACCCGCGACAGCGGCCAGAGCCGCTTCGGCCGCATCGACACCCTGGCCAGCTCCCTGGCCCTGGGCTACGAACAGGGG CCGCAGCGCATCACCCTGGCCTACCAGCGTGTCCACGGCGAGCAGCCGTTCGACTACATGGCCTTCGGCGACGGGCGCTCCAGCGCGTCCATGGTACTGG CCAACTCGGTGGGCTACTCCGACTTCAACGGACCGGGCGAGCGTTCCTGGCAATTACGCTATGACCTGGACCTCGGCGCGCTCGGCCTGCCTGGGCTCAG CCTGCATGCGCTGCATGCCCGCGGCCGTGCCGGGGCCAGCGCCAGCAGTGCCGCCGAGAGCATCTACGCCGGACTCTACGGGCGTGACGGGCGGCACCGG GAAAGCGACCTCGGCTTCGCCTATCGGGTCAAGGCGGGCCCCCTCGCCGGCCTGGCGCTGCGCGCCTCGCAGGCCTGGCACCGGGGCAACGCGAGCTATC TCGACGGCGACATCGACGAAACCCGGCTGGTCGTCGATTACTCCCGCTCGATCTGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CACCCCGGGCCGCGGCGCGGCGTCACTCCGCCGCTTGCGCCACGGCCTTGGCCTTGGCCTTCGCCAGCTTGCCGGCCGCTTCCAGCAGTTCCGGCGCGGC CCACTGCTCGGCGCTGAATTCGCGACGGATCAGGCCGAAACGCTTGGCCGCCTGGATCGAAGCATCCAGCCGGCCAAGGAAATCGGCGTCCAGGCGCGGC GACAGGGCGTCGCCCAGCTTGCGGCCACGGTACTCGCTCTGCAGGATCACCACCGGGTAGCTGGCCTGCTTCGACACCAGTTCGATGTAGGCGTCGCGGT TCTCCTCGCGGGCCAGCCAGTCCTGGGCCTGCAACTGCACCTTGAGCAGCCGCTCGGTGATGTCCGGATGGGCATCGACGAAGGCTCCGGAGCCGACCAG CAGCGCCTGCAGGGTGCCGGCGCCGTTCAGGTCGCGGGTGCTCAGCGGAATTTCCGCGAGCCCGCGGTCGCGCAGGGCGAACAGCCCGGCCAGGCCCCAG
Amino Acid Sequence
>porin
MQNLRRAVFAGLVAGTLSEGAAATAGDGGFVEDSELQFLARTYYFNRDYRDSPNNAGRNRFKPRSERNGYREETTQGLRLQFASGYTPGSLGFGLDAHAM LGLQLDSGGGRTGTGNLPVGADGHPDHRYGKVGGALRLRHGETRLKYGQTTTSAPVFAASSNRTLAGMAYGLLLEDRSFDGLLLEGGRFTAASGPGESKV RGDISTVYGRLGAYPVRLDAVGFLGGQWQATERLQLSLYASRFDDIWQQAYFGASHRQPLGGERALRVDLDAYRTRDSGQSRFGRIDTLASSLALGYEQG PQRITLAYQRVHGEQPFDYMAFGDGRSSASMVLANSVGYSDFNGPGERSWQLRYDLDLGALGLPGLSLHALHARGRAGASASSAAESIYAGLYGRDGRHR ESDLGFAYRVKAGPLAGLALRASQAWHRGNASYLDGDIDETRLVVDYSRSIW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site