Pseudomonas aeruginosa AZPAE14989, NT04_RS05680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TATCACCGGCAATCTCATCGAACAGAAGCGCCTGCGCAATGCGGGCGAAGCTGGGCTACGCGAAGGTGAACGACGCTTTTTCAATACCATCAAGCCCCCA GAGGTCGGCAGCGGATGCGCCGATAGCAATGTCAAACGGCCTTGCATACTGAACCTGAGTGCCCTCTCCGTACCCCGAGATGACGTGCACAACAATCCGG TGGCAGCCCTGAACGGCAAGACAGATAACGCCAATTCACGTGTCTGGATGCCCTACCGAGGCAGCGATCTGAATAACCCTACGCAGATCGACAAAGACCG CGCAGTCACCTGGCAGACCATCACGGTGCCCGCTGGCGAACAGAACAACGAAGCGGAAAATCCCGAGTACGGCAACATGATGCGCGGGGTCGGCACGTTC TACTACGAAACCAACAGCCGCGCCCTCAACAAGGCGGGCGGAGAGACTGTTCTACAGGCCGTTCATGCACGCCTGTATACCAACTGACTGGAGCCAGCGC
DNA Sequence for Gene
>NT04_RS05680
ATGATCCACCAGATTACCCGCGCAGGAAAAAGCCTGCTGGCTGCAGGTTGCACCCTGAGCATCCTGTTCGCCTCTGACAGTTATGCCGCCACGGCCCTGA ATGTCAGCCAGCAACCCCTGTTCCTAACCCAGGGCGTTGCTCCCAACCTGCTGTTCACTCTAGATGACTCAGGCAGTATGGCCTGGGCTTACGTGCCCGA CGGTATTAGCGGGAATAGCGGCAGAGCGGGACGTTCCAGCGATTACAACGCACTGTACTACAACCCCGACTATGCTTACCAAGTGCCCAAGAAATTGACA CTGTCAGGCGATCAGATCATCGTTTCCGACTATCCAGTGCCACGCTTCACAGCAGCCTGGCAGGATGGCTACGCCCAAGGCTCCACCACCAACCTGAGCA ATAACTATCGCCCTCAATGGGGAACCGGCTGGCTTGGTTGCATCGATAGCAGCTGCAATACCGGGAGAGCTTATTACTATACTTATAAGGTAAGCGCTAG CTGCCCTGCACAGCCGGTGAGCAGCTCCAACTCCTGTTATACCTACAATGCTCTTCCTACCAGTCAGGAAAGCAACTTTGCGATATGGTACTCCTACTAT CGCAACCGCATCCTGGCCACAAAGACCGCTGCCAACCTGGCCTTTTACAGCCTGCCGGAAAACGTGCGTCTCACTTGGGGGGCCCTGAACACCTGTAGCA TCGGCGCCAACAGCAGAAGCTGCCAAAACAATGCCCTGCTCCAATTCAACAAGCAGCACAAAATCAATTTCTTCAATTGGCTGGCGAACAGCCCGGCCAG CGGCGGTACTCCTCTGCATGCGGCTCTTGACCGAGCCGGACGCTTCTTGCAAACCAACGGCACAGCTTATACCACCGAAGACGGAAAGACATATTCCTGC CGGGCCAGCTATCACATCATGATGACCGACGGTATCTGGAACGGTCGGAACGTCACCCCCGGCAATCTCGACAACCAGAACCAGACCTTTCCTGATAGCA CCCTCTATAGGCCACAGCCCCCTTATGCCGACAGCAATGCCAGCTCATTGGCTGACCTGGCTTTCAAATACTGGACCACAGACTTACGTCCCAGCATCGA CAATGACCTGAAGCCTTTCATGGCCTACAAGAGTGGGGACGATTCCAAGGATTACTGGGACCCTCGCAACAACCCAGCCACTTGGCAACACATGGTCAAC TTTACTGTTGGCCTAGGTCTTTCCTATTCGCTCACATTGAACTCTGCACCAACTTGGACAGGCAGCACCTTTGGCAACTACGAGGAGTTGATGGCTGGAA GCAAGGCTTGGCCCAGCGTCGGTAACGACGCCGCACCCGGTAACGTCTACGACCTCTGGCATGCAGCTATCAACTCTCGTGGAGACTTCTTTAGCGCGGA ATCACCGGACTCTCTGGTTCAGGCTTTCAATAAGATCCTGACACGGATTTCCGAGCGCAACACCTCCTCCTCCAAACCAGCAATGACTTCCGCGCTGCAG GATGACGGAACCGGCGACAAGCTGATCCGCTACAGCTACCAGTCCAGCTTTGCCAGTGACAAGAACTGGGCGGGCGACCTTATACGTTACAAGGTGGAGT CGACTTCCACCGGTTCGACCAAAACCCAGGAATGGAGCGCCGGCGCACTGCTGGACAACCGAGCTCCCGCTACCCGTAATATTTACATCGCCAGCAATAG CGGAACCAACCGCCTTAAGCCTTTCACATGGAGCAATATTGAGGGAAGTCAGTTAGCCACTTGGCTGAACCGCAACCCGGACAAGGACAATCAGGCCGAC ACCAAAGGAGCACAGCGGGTCGACTTCATCCGTGGCCAGCAGAATATGGATGGATTCCGGCAACGACAGGCGGTGTTAGGGGACATCGTGCACTCGTCTC CAGCCGTGGTCGGACCGGCCCAATACCTCACTTATCTGGCCAACCCCATCGAACCCAGCGGCGACTACGGCACATTCAAGACAGAGGCAGACCAGCGCAG CCCTAGAGTTTATGTTGGATCCAACGATGGCATGTTGCATGGTTTCAACATCAAAACCGGCGTGGAAGAGTTCGCTTTCATCCCTACAGCAGTATTCGAA AAGCTTAACAAGCTTACCGGCATCAGCTACCAGGGCGGTGCCCACCAATATTTCGTCGACGCTACACCGGTCGTCAGCGATGCCTTTTTCGATGGAGCTT GGCACACTGTTCTGATCGGAACGCTTGGTGCTGGAGGTCGCGGCCTGTTCGCACTCGATGTAACCAAGCCGGACGATGTCAAGCTGCTTTGGGAATACGA TAGCAGTACCGACTCGGACCTTGGTTACACCTTCTCCAAACCTACCGTAGCCAGACTGCACAGCGGACAATGGGCAGTAGTTACCGGCAACGGCTATGGA AGCGATAATGACAAGGCAGCTTTACTGCTGATTGATTTGAAAAAGGGAACGCTGATCAAGAAGCTGGAAGTCCAAAGCGAGCGCGGAATAGCCAATGGCC TATCGACGCCTCGCCTGGCTGATAACAACAGCGATGGCATTGCTGACTACGCCTATGCTGGCGATCTGCAGGGAAATATCTGGCGCTTCGATTTGATCGG CAATACCCGCAACGACGACCCAGACACAAATACCTCTATCAATCCCTTCAAGCCCGGAGATGTAGATCCTTCTGCTTTCAGAGTATCGTTCAGCGGCGCC CCGCTTTTCCGTGCTCGCGCCGACAACAATACTCGTCAGCCCATCACGGCTCCGCCTACCTTGGTACGCCATCCTAGCCGTAAGGGCTACATCGTCATCG TAGGTACAGGAAAATACTTCGAGGACGATGACGCTCAGGCCGATACCAGCCGAGCCATGACGCTCTATGGTATCTGGGATCGCCAGACCAAGGGCGAAAG CGCAAACAGTACCCCAACCATCGACCGCAACGCCCTCACAGCCCAAACCATGACAACAGAGGCGAACTCCACATTCGGTAGCGTGAACAGGAATATTCGG CTTATTAGCCAAAACCCGGTGAAGTGGTACAAAGACGGAGCAACCGGTACCGCGAACTCGGATGTGGCTAGCTATGGCTGGCGACTGAATCTGGAGGTCA ATAGCAGCAAGAAAGGCGAAATGATGATCGAAGATATGTTCGCTGCCGGCCAAGTGCTTCTATTGCAGACCTTGACACCGAACGACGACCCTTGTGACAG CGGCTCTACCAGCTGGACCTACGGCCTCAATCCATATACTGGCGGACGTACCAGTTTCACCGTCTTCGATCTCAAACGTGCGGGTATAGTGGACTCTGGC TCGGACTACAACGGCTCGGTCGTATCCGCCTTCCAACAGGATGGACTAGGTGGCTTGGCCATTACCCAGAACGAACAGCGTCAATCCGAGGCTTGCACTG GTGATGAGTGCATCATCTTCAACCCCAGCGACAAGAGTAACGGACGACAAACCTGGCGGGTCGTCGAGGAGAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATGAACCCCTTACGTCTTCTCGCCACAGCTCTTGCAGCTCTAGCTCTGGCTTGCCCAACCTTTGCCTTGAGTGCCACGAATACGTTCGAGAATGTGGG CGTGGTCGAGGATGTTCATCCTGCCGCCGGTCTGGTAGTAGTCGATGGGCAGACATATCGCTTGCCCAACCGTGTCCAACAACAGGACTCGCCGGTCATA TTCTTGGTACGTCAGGGACAGACAGTGTCTTTCTCCGGCAAACTCACCAGCGACCTGCCAGAAATCGAGTCGTTCTACATTATCAAGCAGGCCCCTCTCG TTCCCTTCGGATCGGAGCAGCAACAATGAAGTCGAACAGAGGCTTCACTCTCATCGAGTTGATGATCGTCGTAGTAATCATCGCTATTCTTGCTGGTATC GCCTACCCCAGCTACGACGAATACGTGAAGCGCGGGAATCGCACCGAAGGACAGGCATTACTCAGCGAAGCAGCCGCTACTCAAGAGCGCTATTTTTCAC
Amino Acid Sequence
>type 4 fimbrial biogenesis protein PilY1
MIHQITRAGKSLLAAGCTLSILFASDSYAATALNVSQQPLFLTQGVAPNLLFTLDDSGSMAWAYVPDGISGNSGRAGRSSDYNALYYNPDYAYQVPKKLT LSGDQIIVSDYPVPRFTAAWQDGYAQGSTTNLSNNYRPQWGTGWLGCIDSSCNTGRAYYYTYKVSASCPAQPVSSSNSCYTYNALPTSQESNFAIWYSYY RNRILATKTAANLAFYSLPENVRLTWGALNTCSIGANSRSCQNNALLQFNKQHKINFFNWLANSPASGGTPLHAALDRAGRFLQTNGTAYTTEDGKTYSC RASYHIMMTDGIWNGRNVTPGNLDNQNQTFPDSTLYRPQPPYADSNASSLADLAFKYWTTDLRPSIDNDLKPFMAYKSGDDSKDYWDPRNNPATWQHMVN FTVGLGLSYSLTLNSAPTWTGSTFGNYEELMAGSKAWPSVGNDAAPGNVYDLWHAAINSRGDFFSAESPDSLVQAFNKILTRISERNTSSSKPAMTSALQ DDGTGDKLIRYSYQSSFASDKNWAGDLIRYKVESTSTGSTKTQEWSAGALLDNRAPATRNIYIASNSGTNRLKPFTWSNIEGSQLATWLNRNPDKDNQAD TKGAQRVDFIRGQQNMDGFRQRQAVLGDIVHSSPAVVGPAQYLTYLANPIEPSGDYGTFKTEADQRSPRVYVGSNDGMLHGFNIKTGVEEFAFIPTAVFE KLNKLTGISYQGGAHQYFVDATPVVSDAFFDGAWHTVLIGTLGAGGRGLFALDVTKPDDVKLLWEYDSSTDSDLGYTFSKPTVARLHSGQWAVVTGNGYG SDNDKAALLLIDLKKGTLIKKLEVQSERGIANGLSTPRLADNNSDGIADYAYAGDLQGNIWRFDLIGNTRNDDPDTNTSINPFKPGDVDPSAFRVSFSGA PLFRARADNNTRQPITAPPTLVRHPSRKGYIVIVGTGKYFEDDDAQADTSRAMTLYGIWDRQTKGESANSTPTIDRNALTAQTMTTEANSTFGSVNRNIR LISQNPVKWYKDGATGTANSDVASYGWRLNLEVNSSKKGEMMIEDMFAAGQVLLLQTLTPNDDPCDSGSTSWTYGLNPYTGGRTSFTVFDLKRAGIVDSG SDYNGSVVSAFQQDGLGGLAITQNEQRQSEACTGDECIIFNPSDKSNGRQTWRVVEEK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site