Strain | Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGCAGCCGGAAGGGCCGAGGAGGGTGAAGAATTCGTTGGCGTGGATATCCAGGGACACATCGTCAAGGGCCTTCAGGCCTTGGCCGGGGGTACCGAATT CCATGCAGATCCGCTCGATGGCTATCGCGCTGGTCATGCTGAATTCCATGCAGTCAAGCAGTTGTTATTGTTGAGGTTTTGCGGTTTCTGGGGCCCGCTT CACCTGCTGCGGTTCGATAATGACCGGGGCGCCGCGGGCGCAGAACGATAGATGCGGCCAATAAGGGATCGAACAGGCCAATCTGGTGGCGCTGGAAGAA GACTGCGGATGCTCTCTTGTCGTCTCTTTCGGACAGGAAACTCGGACCTGTCCGAGTCGCCCGGGCGGCTGGCTGACTTTAAGCTTGGCTTCAGCCTGGA GCCGTAGCTTGCGTAGGAAAGGTCGGGCGCAGCCCGTTTCCATACAGCGTACAGGCTCTATGCTATGACTATCCACGCCCAAACTCCCGAGCCGTTTTCC
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DNA Sequence for Gene |
>NT04_RS05280
ATGTCCCGAGCTTTTACGCCTCGCCGTCTGCTGCTGGCCGTCCTGCTGGTCGCGCTGGCCGCGCTGGTCCTTCTCGGCCAGAGCTTCCGCGTCTTCGACC GGGCCTGGTTCGCCGTCCAGGAGTGGCGTCACGCCGATGCCTGGAAAGAGCGCTCGATATGGCTGCCGGACTACCGCGTGCGGATCGAGGCGCAGCCCAT CGAGGGGTTGAACGACGACGTTTCCGCGCTGACCTTCGATCCCGACCGGCGCACCCTGTTCACCGTGACCAACCAGCCGGCGCAGATCATCGAGCTGTCC TTGCAGGGCAAGGTACTGCGGACCATCCCGCTGACCGGCTTCGGCGACGCCGAGGCCATCGAGTACATCAGCCGCGGTGTCTACGTGATCACCGACGAGC GCCAGCAACGCCTGGTCAAGGTGCGCCTGGAGGACGATACGCGCTTCATCGACGCTGCCGATGCCCAGCAGCTTTCGCTGGGTATCGGCCTCAACGGCAA CAAGGGTTTCGAGGGGCTGGCCTACGACGCCGAGGGCAAGCGCCTGTTCGTCGCCAAGGAGCGCGACCCGGTGCGCATCTACGAGATCCACGGTTTCCCC CACACCCAGGCGGACAAACCGTTCGCCGTGCACGTGGTGGACGACCCCGGGCGCGACAAGCGCCTGTTCGTCCGCGACCTGTCCAGCCTGCAGTTCGACG AGGGCACCGGGCACCTGCTGGCGTTGTCCGACGAGTCGCGCCTGGTAGTCGAGCTGGACACCGACGGCGAGCCGGTCAGCACCCTGTCGCTGCTGCGCGG CATGCACGGCCTGAAGCGCAGCGTGCCGCAGGCCGAGGGCGTGGCGATGGACGACCGTGGCGTGCTCTACCTGGTCAGCGAGCCGAACCTGTTCTACGTG TTCAGCAAGGACGAGCCGGCGCAGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCGGCTGCGGGGACGGCAGGAGCGTCCCCTGGCCCGCTCAGAACTGCCAGCTCACCCCGAGCGAATAGCCCGCCTGGTTGCCTTCGCTGTGGGCGAAGC GGCTGTTGGCTTCGGCGAAGACCCCGAGCTGCTCGGTGATCGCCAGTTGCGCGCCAAGCTGGGCGCGGCCGAAATCCTTGTCCACGCCGCCCATGTCGGC GACCCGGACACGCCCGTCGCCGCGGCTGGTCAGGTCCATGTCCTCCAGGCGTCCGTCCGCCAGCTCGCGGACCCAGCGCAGGCTGGCGTAGGGTTGCAGG CGCATTCTCGCACCCAGCGCCAGCTCGCCGCGCAGGCGCCAGCCGAGGCTCGCCTCCAGCGAGTCGTAGTCCTGCTTCTCGTAGCCGAGTGCGGTACGCA GGGCCTCGTCCTCGCGGAAGTCGTCGATGCGGTAGCGCATGTAGTCGAGACCGGCCAGCGGCCCGCTCCGCAGTTCGCCGAAGCTGAAGTCATAGCCGCC
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Amino Acid Sequence |
>transcriptional regulator
MSRAFTPRRLLLAVLLVALAALVLLGQSFRVFDRAWFAVQEWRHADAWKERSIWLPDYRVRIEAQPIEGLNDDVSALTFDPDRRTLFTVTNQPAQIIELS LQGKVLRTIPLTGFGDAEAIEYISRGVYVITDERQQRLVKVRLEDDTRFIDAADAQQLSLGIGLNGNKGFEGLAYDAEGKRLFVAKERDPVRIYEIHGFP HTQADKPFAVHVVDDPGRDKRLFVRDLSSLQFDEGTGHLLALSDESRLVVELDTDGEPVSTLSLLRGMHGLKRSVPQAEGVAMDDRGVLYLVSEPNLFYV FSKDEPAQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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