Strain | Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_34, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACGGCAGGGCGCTGCCGAGCACGGTGGTCTCGCTCTTCAGCAGCTTGGAGCCCAGCAGGCTCTTCAGCGAGCGCATCAGCCGGCCCTCGTAGCCCTCCA GGTACTCGCCGAGCGCCTGGCGGCCGTAGACCGGGCGGCGCTCCTCGACGTTGAAGAACACCACCGAGGGCAGGGTGATCTTGCCGTCCTCCAGCTCGAT CAGCGGTTCGACCTCCGGCCGCCACCAGCCGACGGTGGAGTTGGAGGTGCCAAAATCGATGCCCAGGGCGCGGGCGGCGGTGCTCGGGTTCATGGCGCGA AACGGTCCGGGAAAAAAACGGCCGCGCAGTGTATGCGAGAGCGTCGCGGATTTCACCGCCGGCGATCGGCAGGAAGCGTCCTGGTACGTCCGTGCGGGCC GCCCCGACCTTTGTATACGGATTTGCCAAGGGGCCCGCGCATGGTGCTATGTTGGCGCTGCTTTCCCACTCCGTCTTGCCGTGTTGTCCTGGATTTCGTC
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DNA Sequence for Gene |
>NT04_RS26185
ATGCATAGAGCCTCACACCATGAGTTGCGTGCGATGTTTCGCGCGCTGTTGGACTCCTCCCGTTGCTACCACACCGCTTCCGTGTTCGATCCCATGTCGG CGCGCATCGCCGCCGACCTCGGCTTCGAGTGCGGCATCCTCGGCGGTTCGGTGGCTTCCCTGCAGGTCCTGGCGGCGCCGGACTTCGCCCTGATCACCCT CAGCGAATTCGTCGAGCAGGCCACCCGCATCGGCCGGGTGGCGCGCCTGCCGGTGATCGCCGACGCCGACCACGGCTACGGCAACGCGCTGAACGTAATG CGTACGGTGGTCGAACTGGAGCGCGCCGGAATCGCTGCGCTGACCATCGAGGACACCCTGCTGCCGGCGCAGTTCGGGCGCAAGTCCACCGACCTGATCT GCGTCGAGGAAGGCGTCGGCAAGATTCGCGCGGCCCTGGAGGCGAGGGTCGACCCGGCGTTGACCATCATTGCCCGGACCAACGCCGAACTGATCGACGT CGATGCGGTGATCCAGCGCACCCTGGCCTACCAGGAAGCCGGCGCCGATGGCATCTGCCTGGTCGGCGTGCGCGACTTCGCCCACCTCGAGGCGATCGCC GAGCACCTGCACATCCCGCTGATGCTGGTCACCTACGGTAATCCGCAACTGCGCGACGACGCCCGCCTGGCGCGGCTCGGTGTGCGTGTCGTGGTCAACG GCCACGCCGCCTATTTCGCCGCGATCAAGGCGACCTACGACTGCCTGCGCGAGGAGCGCGGGGCGGTGGCCTCGGACCTGACCGCCTCGGAGTTGTCGAA GAAGTACACCTTCCCCGAGGAGTACCAGGCCTGGGCCCGCGACTACATGGAAGTCAAAGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGACCTCAGGCCAGGCGCTGGCGCAGCGCCTGGTACAGCGGCAGGTCGCGTTCATACTGGCCGGGAACCAGGGCGTGGCGGTGCTCGGCGAGCATGCCC AGGTAGTCGTCCACCGCCGTGTGGTAGCTGGCCAACTGGTCGGTGGCCAGGGGCTGGCCGGCCATGGCGCGGATGTCGAAAGCCCATTGCAACCCGTCGC GGGCGTTCGAATAGGCGGCGCCGTCCATGCCGGCGGTGAGCGCCAGCCACTGGTCGAGGAAGGCCTGCGGTGCGTCGCGCGGGGGGAAGTGGCGGATCTT CGCGGCGCCCACCTCGGTGATGCCGTCGCCGTCCAGGTCGACGCTGTAGCCTTCCGGCAGCAGCAGGTTGCGCGCGCCTTCCTCGCTCAGCGCCTCGACC CGGATCGGCTCGGCCAGGCCCATGTTGCGCTGCAGCGCCTGCAGGTCGTCGGCGCCCAGGCGGGCGAGGAAGCCGCGGGCGTCCAGTTGCGCGCCGTTTT
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Amino Acid Sequence |
>oxaloacetate decarboxylase
MHRASHHELRAMFRALLDSSRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVM RTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIA EHLHIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFAAIKATYDCLREERGAVASDLTASELSKKYTFPEEYQAWARDYMEVKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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