Pseudomonas aeruginosa AZPAE14989, NT04_RS24190

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48452
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 140 177 -
Coils Coil Coil - - 486 506 -
MobiDBLite mobidb-lite consensus disorder prediction - - 411 445 -
PANTHER PTHR48125 LP07818P1 - - 130 598 3.3E-9
NCBIfam TIGR03504 JCVI: FimV/HubP C-terminal domain IPR020011 Motility protein FimV, C-terminal 875 918 6.6E-21
Gene3D G3DSA:3.10.350.10 LysM domain IPR036779 LysM domain superfamily 163 238 1.6E-10
CDD cd00118 LysM IPR018392 LysM domain 175 229 3.23679E-6
MobiDBLite mobidb-lite consensus disorder prediction - - 785 816 -
SUPERFAMILY SSF48452 TPR-like IPR011990 Tetratricopeptide-like helical domain superfamily 526 607 4.81E-5
MobiDBLite mobidb-lite consensus disorder prediction - - 269 283 -
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 547 626 3.9E-6
MobiDBLite mobidb-lite consensus disorder prediction - - 237 312 -
SMART SM00257 LysM_2 IPR018392 LysM domain 175 230 0.0037
Coils Coil Coil - - 319 367 -
MobiDBLite mobidb-lite consensus disorder prediction - - 380 394 -
NCBIfam TIGR03505 JCVI: FimV/HubP N-terminal domain IPR020012 Motility protein FimV, N-terminal 182 254 4.0E-30
MobiDBLite mobidb-lite consensus disorder prediction - - 372 445 -
Gene3D G3DSA:1.20.58.2200 - IPR038440 FimV, C-terminal domain superfamily 858 919 1.9E-27
MobiDBLite mobidb-lite consensus disorder prediction - - 237 259 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.