Strain | Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGCTCAGCCTGACCGGCTCCTACGCTGGCGCCATGGGCCTGCCGCAATTCATGCCGAGCAGCTTCCGCGCCTACGCGGTGGACTTCGACGGCGATGGCC ACATCAATATCTGGAGCGACCCGACCGACGCCATCGGTAGCGTCGCCAGCTACTTCAAGCAGCACGGCTGGGTCACCGGCGAGCCGGTGGTCTCGGTGGC CGAGATCAACGACGAGAGCGCCGAGAGCGCGGTGACCAGGGGCGTCGACCCGACCATGAGCCTGGGCGAGCTGCGTGCCCGCGGCTGGCGCACCCATGAT GCGCTGCGCGACGACCAGAAGGTCACGGCGATGCGTTTCGTCGGCGACAAGGGCATCGAGTATTGGGTCGGTTTGCCGAACTTCTACGTGATCACCCGCT ATAATCGCAGCGCCATGTATGCCATGGCGGTTTATCAGCTGGCGGGCGAGATTGCCCGCGCGCGAGGTGCCCATTGAGCAAGCGTGTCCGCTCCTCCCTG
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DNA Sequence for Gene |
>NT04_RS02005
ATCCTGCCCGCCGTCTGCGGCCTCGGGCTGGCGGCCGTGCTGTTGAGCAGTTGCTCCAGCAAGGCGCCCCAGCAGCCGGCCAGGCAGGCGGGTATTTCCG GGCCGGGCGACTATTCCCGTCCGCATCGCGACGGCGCCCCCTGGTGGGACGTCGACGTGTCGCGGATCCCCGATGCGGTGCCGATGCCGCACAACGGTTC GGTGAAGGCCAACCCCTACACCGTGCTGGGCAAGACCTACTACCCGATGAACGATGCGCGGGCCTACCGGATGGTCGGCACCGCGTCCTGGTACGGCACC AAGTTCCACGGCCAGGCCACCGCCAACGGCGAGACCTACGACCTCTACGGCATGACCGCCGCGCACAAGACCCTGCCGTTGCCGAGCTACGTGCGGGTGA CCAACCTGGACAACGGCAAGAGCGTGATCGTCCGCGTCAACGACCGCGGCCCGTTCTATTCCGACCGGGTCATCGACCTGTCCTTCGCCGCGGCGAAGAA GCTCGGCTATGCCGAGACCGGCACCGCGCGGGTCAAGGTCGAAGGCATCGACCCGGTGCAGTGGTGGGCCCAGCGTGGCCGGCCGGCGCCGATGGTCCTG GCGCAGCCCAAGCAGGCGGTGGCCCAGGCCCCCGCTGCGACGCAAACTCAGGCGGTGGCGATGACCCAGCCGATCGAGACCTACACCCCGCCGCCGGCGC AGCACGCGGCCGCCGTGCTGCCGGTGCAGATCGACTCAAAAAAAAACGCTTCATTACCAGCCGATGGCCTGTATCTCCAGGTGGGCGCCTTCGCCAACCC GGATGCAGCGGAGCTGCTGAAGGCCAAGCTGAGCGGCGTGACGGCTGCGCCGGTGTTTATCAGCTCGGTCGTACGCAACCAGCAGATTCTGCACCGGGTG CGGCTGGGACCGATCGGTTCGGCGGACGAGGTTAGCCGCACCCAGGACAGCATCCGCGTGGCCAACCTTGGCCAGCCGACGCTGGTACGCCCCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCCTACTCACGCAGGGAATTCCCGCAAGGGATTGTTTGACCATTGGTAGAACCAGAGAGACGGATGAACATCACCACTATCGCGAAACGCTTGTCACT GCTTGTCCTGTTCATCGCCCCTACGGCTGGCTGGGCTGCTGAATCCATGGTTCCGGCGCCGCCGCAACTGGCCGCCAAGTCGTACGTCCTGATGGACGGC GAGAGCGGCCAGGTTCTGGTCGAGAACAACGGCGACCAGCGCCTGCCGCCGGCCAGCCTGACCAAACTGATGACCGCCTACATCGCCACCAAGGAGATCG AGGCCGGCCGCATCGGCGAGAACGACCTGGTCACCGTCAGCGAACATGCCTGGCGCACCGGCGGTTCGCGGATGTTCATCAAGGTCGGCAGCCAGGTATC GGTGAGCGACCTGCTGCATGGCATCATCATCCAGTCCGGCAACGACGCCAGCGTCGCCCTGGCCGAGCATATCGCCGGCAGCGAAGACGCCTTCGCCGAC
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Amino Acid Sequence |
>lipoprotein
MLPAVCGLGLAAVLLSSCSSKAPQQPARQAGISGPGDYSRPHRDGAPWWDVDVSRIPDAVPMPHNGSVKANPYTVLGKTYYPMNDARAYRMVGTASWYGT KFHGQATANGETYDLYGMTAAHKTLPLPSYVRVTNLDNGKSVIVRVNDRGPFYSDRVIDLSFAAAKKLGYAETGTARVKVEGIDPVQWWAQRGRPAPMVL AQPKQAVAQAPAATQTQAVAMTQPIETYTPPPAQHAAAVLPVQIDSKKNASLPADGLYLQVGAFANPDAAELLKAKLSGVTAAPVFISSVVRNQQILHRV RLGPIGSADEVSRTQDSIRVANLGQPTLVRPD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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