Pseudomonas aeruginosa AZPAE14989, NT04_RS01085 (fecE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGCCCTGCGCCTCCAGCTCCGCACGGTATGGCGCGGCGCTGTCGGCGCCGGTGGCGGAGGCGACCAGCAGGTCCGGATCCTGGGCGATCACCGCTTCGA TGTCGAAGCGCAGGTTGCGGTAGAGCACCTCGACGCCACGTTGGTCGGCGACCTTCGCCCATTGCGAGAAGAAGCCCTTGGCGTCAGTCAGGCGACTTGG CGTGGTGGCGGCGCTGGCCACCAGCGGCGCGTCCATCGCCAGCAGGATGCCGGTGACGCTCGGGGTGGTGGAGACGATCCGCGCCGGCTTCGGCTCCCCG GCCGCGGCGAGGGTGGCGAACAGGCTCAGGGCGAGGGCGAGAAGCGGCAGGGCGGAGCGGCGGCGGGTCGGCATGAAGGCTGTTTTCGCTGTAGGGGAAG CCGGGCGGACGGATTCATATGATAATGCTTCTCATGCAGTCTATTCCATAATGTAGAATCGATTCCACATATTCGAGCCATTCTCATCCAGGAACCTCCC
|
|
| DNA Sequence for Gene |
>NT04_RS01085
|fecE
ATGACCCATCGCCTGCACGCGGACGCCGTGACCTTGCGTCGCGACGCGCGGACCGTTTCGCGGAATCTCTCGCTGGCCATCCCCGAGGGTTCGTTCAGTG TGATCGTCGGGCCCAACGCCTGCGGCAAGTCGACCCTGCTGGCGGCATTGTCGCGCCTGTTGGCGCCGGCCGAGGGCCGGGTGGTGCTGGACGGTAGGGA TATCCACAGCCTGCCGGGACGGGAAGTGGCGCGGCGTCTCGGCCTGCTGCCGCAGAGCGCGCTGGCGCCGGATGGCATCACGGTGGCCGAGCTGGTGGCG CGCGGGCGCTATCCGCACCAGTCGTTCCTGCGCCAGTGGTCGCCGGCGGATGAGCGCGCGGTAGCGGCGGCGCTACGCGCCACGCGGGTCGACGGCTTGG CCGAGCGACCGCTCGACGCGCTCTCCGGCGGCCAGCGGCAACGCGTGTGGATCGCCATGGTGCTGGCGCAGGAAACCCCGTTGCTGCTGCTCGACGAGCC GACCACCTACCTGGATATCGTCCACCAGATCGAATTGCTCGAACTGCTCGCCGAGCTGAATCGCCAGGGGCGCACCATCGTCGCCGTGCTGCACGACCTC AACCAGGCCTGCCGCTATGCCTCGCACCTGATCGCCATGCGTGACGGCGCGATCCTCGCCGAGGGCGCGCCGGCGCATATCTTCACCGAGCGTCTGGTGG AGGAGGTGTTCGGCTTGCGCTCGTTGATCATCGCCGACCCGGTCAGCGGCACGCCGCTGCTGGTGCCGCGCGGGATCGCCGCCGACGCGCCGGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGTGGCTCAGCGCGGCGGCGGCCGCATGCCGGGATGGAGGACCAGGCCGCCGGTGGACTGGTTGACCTGCAGCGCCTCGTGGAACAGCGCGTCGCGGTCT TCCGCCGACTGCAACTGGCCGAGATCGGTCACCGTGGTCATCGCGCAGACGATCTCCTGCTGGGCGTCGAACACCGGCGCCGCCTGGCCGGTGACGTTCG ACAGCAGGTGGCTGGTCAGTTCGGCCCAGCAGCGCTCGCGCACCTCGTCGAGCAGCGCGCGGCTCGGCGGGCTGCCGCGGAAGTGCGTCGGTTGCTGCTT GCGCGCGGCGTCGACCACGGCCTTCGGCAGGAAGGCCTGGAACACCAGGCCGCAGGCGGTGTTGTCGATGGGCAGGATATCGCCCAGGGCCAGCGGGTTG ATCGAGAAATAGGCGCTGCGGTACCAGCGCACCAGGGTCGGGCCGCGCTCGGTCCAGATCGCCACCCCGCCGCTGGCGGCATGCCGTTGGGCCAGGGCCT
|
|
| Amino Acid Sequence |
>ABC transporter
MTHRLHADAVTLRRDARTVSRNLSLAIPEGSFSVIVGPNACGKSTLLAALSRLLAPAEGRVVLDGRDIHSLPGREVARRLGLLPQSALAPDGITVAELVA RGRYPHQSFLRQWSPADERAVAAALRATRVDGLAERPLDALSGGQRQRVWIAMVLAQETPLLLLDEPTTYLDIVHQIELLELLAELNRQGRTIVAVLHDL NQACRYASHLIAMRDGAILAEGAPAHIFTERLVEEVFGLRSLIIADPVSGTPLLVPRGIAADAPG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|