Strain | Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGCGTCGCCGGCATCGCCACGCTGGGCCCGTTGCTGGCGGCGATCACCCCGACCCTGCTGAACTTCCTGTTCGGCATCGTCGCCGGCGCCGTGGTGCTG GCGGGGGTGCTGCTGGTCAAGCGCCTGCTGCCGAAGAAGAAAAAGACTGGCTGAGCCTGCCATCGCCGGCAGCACCATCGCGGAGGGCGGATAGCCGCCC TGGCGCACATCCCACGAAGCGGTTGTGCGCCCTGCCCCGGAAGTCCCCCTCCGTTTCAATTCAATAATTTTGCACTGTAATAGCAACATTATTCGTTGGA GACGAATAAAGCTCCCCTCCTAGAATGTCCACCAGTGCCATGAGCCGTCTGTTCCGAGCCTTCCAGACGAAGATCCGACCTCCGCACTCCATCGACCCGG CAACGGGATACCCAGAAAAATACCGATAACCCAACGAGGACCCGAGGGTCGCGCCTGCTCGCCAGCCGGCCGGACCCCGGGGCCCGGCGTGCCAGCGACC
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DNA Sequence for Gene |
>NT04_RS14950
ATGAACGATACGGATAGCAGAAAAGATCCGGACGGCTACAACTACGACGTCGTCCGCCAGTTCACCCTGATGACCCTGGTCTGGGGCATCCTCGGCATGG GCCTGGGGGTGTTCATCGCCGCCCAGCTGGTCTGGCCGGCGCTCAACCTCGACCTGCCCTGGACCAGCTTCGGCCGCATCCGCCCGATCCACACCAGCCT GGTGATCTTCGCCTTCGGCGGCAGCGCGTTGTTCGCCACCTCCTTCTACGTGGTGCAGCGCACCAGCGGCGTGCGGCTGATTTCCGACGTCCTGGCGCGC TTCGTGTTCTGGGGCTGGCAGGCGGCGATCGTGGGGATGATCGTCAGCTACCCGCTGGGCTACACCACCTCCAAGGAATACGCCGAGATGGAATGGCCAC TGGCGCTGTGGATGGCCATCGTCTGGGTGGTCTATGCCTACCTGTTCTTCGGCACCATCGCCCGCCGCAAGGTGAAGCACATCTACGTCGGCAACTGGTT CTACGGCGCCTTCATCATCGTCACCGCGATGGTCCATATCGTGAACCACGCATTGCTGCCGGTGAGCCTGGGCAAGTCCTACTCGGCCTATTCCGGCGCC ACCGACGCGATGATCCAGTGGTGGTACGGGCACAGTGTGGTCGGCTTCATCCTCTCGGTCGGCTTCCTCGGCATGATGTACTACTTCGTGCCCAAGCAGG CCGGGCGACCGATCTACTCCTATCGCCTGTCCATCGTGCATTTCTGGGCGATCATCTCGATCTACATCTGGGCCGGTCCGCACCACCTGCACTACACCGC GCTGCCGGACTGGGCGCAGTCGCTGGGCATGGTGATGTCGCTGATCCTCCTGGCACCGAGCTGGGGCGGCATGATCAACGGCATGATGACCCTCTCCGGG GCCTGGCATAAGTTGCGCGACGACCCGATCCTGCGCTTCCTGGTGGTGTCCCTGGCGTTCTACGGCATGTCCACCTTCGAAGGCCCGATGATGGCGATCA AGACGGTCAACTCGCTGTCCCACTACACCGACTGGACCATCGGCCATGTCCACGCCGGCGCCCTCGGCTGGGTGGCGATGATCTCCATCGGCACGCTCTA CCACATGATCCCGAAACTCTGGGGCCGCGAGCGGATGCACAGCATCGGCCTGATCAACGCGCACTTCTGGCTGGCCACCATCGGCACCGTGCTGTACATC GCCTCGATGTGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGGGCGATCAACGAGGACGGCACGCTCACCTACTCGTTCGTCGAGGCGCTGGCGGCCA GCCATCCGGGCTACGTGGTGCGCCTGCTCGGCGGCGCCACCTTCGCCAGCGGCATGCTGCTGATGGCCTACAACACCTGGCGGACCCTGCGCAGCGCGCA GGAGCAGCGGCAGCCGGTCCTGGCGGCCGGCCAGGGGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACATGCTGTTGTCCCTGCTGTGCCTCCCCACCCTGGTGCTCGGCCGCGCGCTCAGCCTCGCCGGCAGTACCCGCGAGGAACGCGAGCAGGCCGCCCTGCT GCCGTTCGCCGACGATCCCGAGGCCGCCCGCCGGGTCGCCCGGGATACCGGCAAGATCTGCCGGCAGGTGGTCCGCCCCCTCGAGGAATCCCGCGAGGCC GCCGGCCCGCCGTTCCTCGCCTGAACCGACTCCATCATCCAGGGATGGATGCCTCCAGCACGAAAGTGCCTTACGGGGCCGGCAACGGCCCCTTTCTTTC GCTTCGAAGAGTTCCATGAACGACTCCCCCAGCACCGCCGTACGCACCTGGCTGAAAGGCTTCCGCCCCCTGACCCTGAACGCTCGACCGCGCGACTGCC TGCGCGCCGGACTCGGTGCCTGCATCGGCGCGCTCGCCGCGGTATTCGCCTGCCAGGCGTTGTTCGGCAGCGAACTGGCGCTGCGCCTGGCAGCGCCGCT
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Amino Acid Sequence |
>cytochrome c oxidase, cbb3-type, subunit I
MNDTDSRKDPDGYNYDVVRQFTLMTLVWGILGMGLGVFIAAQLVWPALNLDLPWTSFGRIRPIHTSLVIFAFGGSALFATSFYVVQRTSGVRLISDVLAR FVFWGWQAAIVGMIVSYPLGYTTSKEYAEMEWPLALWMAIVWVVYAYLFFGTIARRKVKHIYVGNWFYGAFIIVTAMVHIVNHALLPVSLGKSYSAYSGA TDAMIQWWYGHSVVGFILSVGFLGMMYYFVPKQAGRPIYSYRLSIVHFWAIISIYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSG AWHKLRDDPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGTLYHMIPKLWGRERMHSIGLINAHFWLATIGTVLYI ASMWVNGITQGLMWRAINEDGTLTYSFVEALAASHPGYVVRLLGGATFASGMLLMAYNTWRTLRSAQEQRQPVLAAGQGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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