Pseudomonas aeruginosa AZPAE14989, NT04_RS13815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCAGAAGCTCGAGGACGAGGACGACGGCAGCGTCTACTACACGCGTATCGCCTGCAAGCTGCTCGACCTGCAAAGCTGCCGCTGCACCAACTACGCCG AGCGCATCCGTTTCGTCCCCGACTGCATCCAGCTCACCCCGGCGCAGGCCGACGAGTTCCAGTGGTTGCCGCCGACCTGCGGCTATCGCCTGGTTGCCGA AGGCAAGGACCTGCCGCTCTGGCACCACCTGGTCTGCGGCGACCCGGAGCGGGTCCACAAGGAACGCATTTCCCAGTCCGGGCGCATGCTCAGCGAGACC CAGGTGGCCGAGGACGACTGGGAGGACTACCTGATCTTCCGCGCCGGCTGAGCTCGCGTCCGTCGCACTTCCTTACCTTTTGAAATGATATGTATTATCA TTCGCATATTTGCGAAGGGACTTCCGTATCCGACGGAAGCGGGGAGGCGAGGTGTTGCAGCGGGTCAACGGCGCGGGGGGCGCCGCCGGAGGATGCACGG
DNA Sequence for Gene
>NT04_RS13815
ATGGATGAGCGCTTCCGTGGTTCCGTCTCGCATGCCTATCAGGCGTTCCATGGCGAGTTGCTGCGCTTCCTGCGCAAGCACCTGGGCAGTTCGGCGGACG CCGCCGACCTCGCCCAGGATACTTTCGCCCAGTGGCTGAAATGGCCGGGCCGGCAATCGGTCGAGCAGCCGCGCGCATTTCTTTTCCAGATCGCCCGCAA CCTGTTGCGCGACCATTGGCGCCGGCAGCAGAGCCGCGGCCAGGATCTCGACCGGCCGGCGGCGAACGACGAACCCGTCGCGCTGGAAGGCGAGGCGGCC GGGCCGGGCGAGCGTTTCGAACAGCAGCAGCGCCTCGGCCACCTGGCGGCCGCGCTGGCCGAGCTGCCGCCGCGGCGGCGCGAAGCGTTCGTCCTGCACA AGTTCGACGGCCTGTCCCAGGTCGAAGTGGCCGAGCGCATGGGAATCTCCCTGAGCATGGTGGAAAAGCACATCGCCAGCGCCTTGCTGCACTGCAAGCG GCGGCTTGGCCAGGGAGGCGAAGGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCCGCTGGAACGACTGGAACCGCTGTTCGCCGACGAAACCGAAGAGGACATCGATCACCGCGCCGCCTACTGGTTCAGCCGGCGTCGTTCCGGGCATTT CAGCGCTGCCTGCCGGGCCGAGCTGGAGGATTGGCTACGCGCCGATCCGCGCCATCGCGAAGCGCTCGAGGGCATGGAGCGGCTCTGGCGCGAGTTCGAC GGCCTGCCGCGCCCGGCGCTGGAGGATATTCCCGAGCCGGTGCCGGCCTGGCGCCTGCCACGGGCGCTGGCGGCGGCGTTCTTCGTGTTCTGCGCGCTGC TCGTCGCCACCCTGTTCTGGCGCGACCAGTCGCTCGGGCCGAACCTCGCCTACGGCACGGCGCCTGGCGAGCAGCGCGAGGTGGTCCTGGCGGACGGCTC GAAGCTGTTCCTCGACGTCGATACCCAAGTGCAGGTGCGTTACGCCGAGCGCACCCGCGACGTGCTGTTGAAGAAAGGCGAGGTGTTCTTCGTGGTCAGC
Amino Acid Sequence
>RNA polymerase sigma factor
MDERFRGSVSHAYQAFHGELLRFLRKHLGSSADAADLAQDTFAQWLKWPGRQSVEQPRAFLFQIARNLLRDHWRRQQSRGQDLDRPAANDEPVALEGEAA GPGERFEQQQRLGHLAAALAELPPRRREAFVLHKFDGLSQVEVAERMGISLSMVEKHIASALLHCKRRLGQGGEG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site