Pseudomonas aeruginosa AZPAE14989, NT04_RS13050
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCCATGTCGGGGTTCCGCTGGGGATGGAAAGGGCATCATGGCTGAGGTGGCTTTATTCGTCGAACGATGGCTGGCCCTGCCGGTAGATCGGCCAGGACT TCATGCGCTGCGGAAACGGCCTGACCAAGTGCAGCGGCTTGCAATCAAAAACGCTGGGCTCGCAATCAGCGTGGCTTTGTCCGGAAGCTCGCGAAGGGGC GGCATGGATGAATTTTGAAAGTGGGACTTCGTTAATGAACTGAAGGTATGCGGCTTCCGTGACTGGCAGGGGTAGATGAGGTGTGCGTTCAGGAAATGAC CGTTTGATGGACACATGCGCAAATGAGTCAGCTCTATTGAAGGAAATCGATGACGCTCATGGTCGTGTGGAGGGATTGTAGTTGATTGGCGTGTGTGCCA GGTGCATTGGCGTTGATTTTAGAAGTTGGATTCCAGTGGGCACATATTCCAGCAAGAATACCTCTGTATATTTTCTCAAGCTCAAATCGAGGTAAAAACT
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| DNA Sequence for Gene |
>NT04_RS13050
ATGGCTGATGCACCACCGCCACTGATTGTTAGATACTCAAGTCGCCCCGGGAAACCTGGCGGAGTTAGCATAGACGTATCACGAGACAGGCAGGACATAC TAAGCAACTATCCGTTCGGTAACCCTTTCCGTGGTTTTACTCTGGCCATGGAGGCTGACTTCAAAAAGAGGAAAGAGAGTCTGGAAGCCGACGTTCAGGC AGAGTTGGATACGGAAGCTGCCAAGTATCCGGCACTACCTGCCAGCTTCACACCTGAGCAGTGGCTGGAAAGATCAACCGTAGTTGTCACCGGGCTGCTA AATCGAAAGCGCCCTGAACTAGATAACGAATTGGATGTGGTTCAGAACTCGGCTAGTCTGGATAAGCTGCAAGCAAGCTACAACACAATCATCCTGAATG ATCAGATCAATAGTCTTCAAGAGCGCTTGAACAAGCTCAATGCTGAAACCGACCGCCGCCGGGCGGAGGCAGAAGCCCAGCGTCAGGCAGAAGCGGACGC CAAACGCAAAGCGGAAGAAGCGGCACGCCTGGAAGCCCAGCAGGTCACTCAACAGCTCGGTGCCGACTTCAACGCGATCACCACTCCGACCGCCACCAAG GTCCAGCAACGTGTGAAAGCAGTGGATGCTAGTCTGTCTCAGGTTTCCACCCAGGTCAGTGGTGCAGTCGCCTCGGCAACCCAGGCGGTGCAGGTCAAGA CAGCGCAAGCCCAGCAACAAGCCAACAGCCAGATTTCGTCCAGCCAGAACCTGATCAGCGCGGCATTTCGGAATCAGATTGCCTTGGCAGCACAGGCCAG TGGAGAAGCCCAGGTCACGGCTTTCAACACCAAAGTCAAGCAGATCGTCAACGAAGCCACGGCGTTTTCGACAGCACGAAAACAAGCGCTGGCTCAGTTT GCTGCCAATGCGGCCGCCGAGGTCGAAACCGAGGTCAACAGGCTAACCGCCCAGGTCAAGGCCAGCCCCACCAAGGCGGCTTCGCAAGCTGCACAAGCAA CCCTTCGACAATTCACTGAAAGCACCTATGCCAAGGTGAACACCTTTGCCCTGCAGACCGAAGCAGCGCTGCAGGCTAAGGCAAAAGAGGTCTCAGCAGC GGTAGCCGAAGCACAGCGTGCGGCGACCAACGATTTGCAAAAAACAGCCGATGTAGTACCAGGTCAGATCATCCAGGCTGCGAACACCTTGGCGATGCCG GCCACCTCTGCGCCGCTGGTTTCGGTGGCCGGGTTTGGTAGTGCGGCAGTGGAGACGGCTCGCCTGGCGGCTTCCCTAACGAATGCTGTCAATCGCTTGA TTCAGATTGCTGGTAGTGGACCTGGCGCATACGTTGCCACCTTCGCGGTGCTATCGCTCTACTCCGACCAGGCTGGTAAAGACAGTGACAAGGTTCCTGC CGGCGTTCGCAATGCATTGGCACTGGAGGCGTCCGCTCTGGGGCTTCCTGGCACGGCTGATTTGCAAAGCGTCGCCAAGGCAGGCGGCACGGTTGATATG CCGGTACGACTCACGAGTGCTGCACAAGAGAGCCCGAGTGGTAAGTCGCAGATTGCCGCGGTGCTGACCAACGGGGCAACTGTCCCCAAGGGGGTGCCTG TTCGTGCCGCGACCCTCAATGCTGCGACGGGCCGGTATGAGGTGACGGTTCCCGCAAAATCCACCGTGCCGAATACACCACCACTGATCTTGACCTGGAC CCCTGCTACCCCTCCAGGAAGCCAGAACCCCTCAAGCAACACTCCGGTCGTACCGCAGCCGGTTCCGGTGTATGAGGGAGCAACGATCACCCCAGTGCAG GCCGAACCGGAGTCCTATCCGGGAGTGCCATTAGATCTGGACGATCTGATCGTGATCTTCCCGGCGGGCTCGGACGTTCCTCCGCTCTATCTGGTCTTTT CCAAGCCGCCAGTTAAGCCGCTGGAAGTGGACATTTATGGTAATTTTGCAGGAAGACCTCGTGATGGAAACCATCTTGACCATATGCCGGCTCAAGGTGC GTTGGCGACGAGTTTGAGATCGAATATTCCGGGAATTCAGGATAAGAAAATTCGGGAGTTGATGAAGAAAGGGGCTAGCATCGCTATTCCTGCGCGGATA CACCAGAAGTACAGCGAAACCTACGGCGGGCGTAATACTAAGGAAAAACAGCGTAAGGATGCAGCAGATTTAAGAAAGGCAGTAGATAGCAACTTTGACG CAGTCAAGGGTGCTTTGCTGGAAGAGGGTTTTTCTGAGAAAGATGTTGAAGATGCACGTTCAAGGTTGCACAAAATCAATACAGAGCAGGGGTGGTACTG A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAATTCTGAATCAATCAAGAAAATTGTTGGTGCTCTTGGACAGAGCTATGGCGATTTGTTAAAGAAAAATTTAATACCGGAAACCCCTCTTGAGAAGCA GTACGAAGATTCTGAATGGCTTACTCTAGATGTCGATACTGGTGTTGATCTAGAGTTTTGGGGGGAAAGTAAAGTTGCCGAGAAACTCCATATAGTTCTT ATAAAAACGATGGACAACATTCCAGCCTATCAAGGTGAACTGCCACCTCCCTTTTCTAGGAGTATGGATAAAACAGGTGTTCGTTCCATTCTTGGCACTC CAGAGAAGACCAAAGAGCCCTTTACAATGCCTGTGATCGGATTAGTTGGAGGTTGGGACTACTATGCTTATCCTGATCGACCTGATATTAAGGTGTTTTT CAATTATACCGCTGAAATGAAGGTTGACACTCTTTCTTTCATACTAATGAATCCTGATCATGACTGATTTTGTAGTCACTTTTTGAGGAATATAAACAGA
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| Amino Acid Sequence |
>pyocin killing protein
MADAPPPLIVRYSSRPGKPGGVSIDVSRDRQDILSNYPFGNPFRGFTLAMEADFKKRKESLEADVQAELDTEAAKYPALPASFTPEQWLERSTVVVTGLL NRKRPELDNELDVVQNSASLDKLQASYNTIILNDQINSLQERLNKLNAETDRRRAEAEAQRQAEADAKRKAEEAARLEAQQVTQQLGADFNAITTPTATK VQQRVKAVDASLSQVSTQVSGAVASATQAVQVKTAQAQQQANSQISSSQNLISAAFRNQIALAAQASGEAQVTAFNTKVKQIVNEATAFSTARKQALAQF AANAAAEVETEVNRLTAQVKASPTKAASQAAQATLRQFTESTYAKVNTFALQTEAALQAKAKEVSAAVAEAQRAATNDLQKTADVVPGQIIQAANTLAMP ATSAPLVSVAGFGSAAVETARLAASLTNAVNRLIQIAGSGPGAYVATFAVLSLYSDQAGKDSDKVPAGVRNALALEASALGLPGTADLQSVAKAGGTVDM PVRLTSAAQESPSGKSQIAAVLTNGATVPKGVPVRAATLNAATGRYEVTVPAKSTVPNTPPLILTWTPATPPGSQNPSSNTPVVPQPVPVYEGATITPVQ AEPESYPGVPLDLDDLIVIFPAGSDVPPLYLVFSKPPVKPLEVDIYGNFAGRPRDGNHLDHMPAQGALATSLRSNIPGIQDKKIRELMKKGASIAIPARI HQKYSETYGGRNTKEKQRKDAADLRKAVDSNFDAVKGALLEEGFSEKDVEDARSRLHKINTEQGWY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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