Strain | Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCGCCGCTGGCCTTCCGCATGCGCCTGGCGCCCTGGTCGACATTGCTCGGCCTGGCGCTGATGGCGGCGATCCTGGTCACCACCTTCTTCACCGAGGC GTTCCGCATGACCCTGGTCTTCGGCGTACCGTTCCTCGCGCTGCTCAGCGCACTCTACCTGGTCTTCGTCCGCAAGCCCGGCAGGGATTGTCCGATAGAG CGGGCAACGCCCTAGGCGCTCTCCGCCCTGCGAACCTGGCGCGCAGGGCGAAGCCCGACCGGCGCGCCCTTTCCGGACCGGACGGTTCCGTTCCCCATAC CTTTTCCGTCGCACAAAAAGCATTACCCGCCGGCCGCCGCGACTCCGTAGCGTAGTGCTCAACCGGACGTTCCGGCCCGCGGCGCGCCGCGGCCGGCGCG CTCCCGTCAGGGACGAAGTGGCGGCACGCCCAGCCATCGAGCGCACTGCATCGCTCTGCCCTGTGGGGACGCAGACGTCGTCAGCCATGAGGGGAACACG
|
|
DNA Sequence for Gene |
>NT04_RS10885
ATGCATCCGACCTTTTCGCGGGTCCTGCTGGCCGCCGCGCTGGCCAGCGCCGGCAGCCCTGCCGTCGCCACCGAAATCCAGCTCGAGCAAGGCTGGAACG CCGAGCAACGCGCCTCCTGGTACGACGCCTCGCTCGGTTCGCGGCTGCTGCCGCTGGCCTGGGCCCAGGCGCTGGAGCGTCCGGACAGCGAGGAGCGCCT GTTCTCCGAAGACAACGCCCGGCGCCTCGGCTTTCCCCTGCGCAACTGGCAAGGCGGCGAACTGCGCCTGCCGCGCGGCTTCGCCCTCGACCAGCAGGAC GACAGCCAGTTCTCCGACACCCGCCTGCGCTGGAAAGCCCGCCAGTCGTCCAGCGAACCCTGGGTCGGGCTGAATTGCGCCGGCTGCCACTCCACCGACA TCAGTTACCGCGGCAGCGAACTGACCGTCGACGCCGGCGCCACCCTGGCCAACGTCCAGGCGATCTTCGACGAAGTGCTCGCCGCGCTGCGCCGCACCAG CGACGACGGCGACAAGTTCGCGCGCTTCGCCGGCAACGTCCTCGGCAGCGAGGACAGCCCGGCCAACCGCGACCTGCTGAAGGCCGCCCTGGCCAAGCGC GCGGCGCTGATCGACACCCTGCTGAGCATGTCCGCCACCGACCTGCAACCCGGCCCGGGGCGCCTCGACGCCACCGGCCAGTCACTCAACCGCGCGGCGA TCAACTCTGGCGCCCGTCACCTGCAAGCGAACCCGACCGACGCGCCGACCAGCTTCCCGGCACTGTGGCACACGTTGCAGATGGACAAGCTGCAATCCAG CGGATTCGTGCCCAACGTCAAGGTCCTCGACCTCAACGGCCAGGTCTTCGACCTCGGCTACCTGGCCGGCGACATCGGCGTGGTCCAGGGCGACTACGGC GACGTGGTCAGCCATCCGCTGTCCGGCCTGGAGGGCTACATCTCGAGCATCCGCGTGGACAACCTGACCCGTGTCGAGGGCCTGATCCACAAGCTCAAGG CGCCGGCCTGGCCGAGCCAGCTGTTCGGCGCCCCGGACAGCGCCAGGCTGGCCCAGGGCAAGCGCCTCTACGAGGAGAACTGCGCGGCCTGCCATGCGAG CATCGGCCGCGACGACCTGCAAACCCCGATCAAGGTCCGCCAGGTGCGCCTGAAGGCCCATGGCGACGACGCGCCGATCGGCACCGACCCGTGGATGGCC TGCAACACCTTCACCTTCAGCAGCCCCAGCGGCAACTACTTCGGCCTGTTCCGACCGTCCCTCGGCACCCCCAGCGGCGTCGGCATCGTCGGGCGGACTT CGAAGATCGCCGACATGCAGGTCCCCGAGGTGTTCCAGATCATGCTCGGCAAGAAAGGCCAGCTGGCCGACGGCATCGCCGAGATCATCCACGCCATCGT CACCGGGCAGCAGACCCTGCCCGGCTCCGACAGCCTGCAAGCGCTTCCCACCGGGCAACTGCTGCTGGCCGGCGGCGACCCGGCCGGCAGCCAGGCGCAG AGCCTCGCCGCCGGCGAAGTCCCCGCCGACAAGAGTGCGCGCAAGGACTACTGCCTGAACACCGAGCATCCGTTCCTCGGCTACATCGCTCGCCCGCTGA ACGGCATCTGGGCCACCGCGCCCTACCTGCACAACGGTTCGGTGCCGTCGCTGTACGACCTGCTGCTGCCCCAGGAGCAACGGCCGACCACCTTCTACAC CGGCAGCCACGAGTTCGATCCGAGCCGGGTCGGCTACCTCACCGGGCCCGGCCCGGACAACGCCTTCCTCTTCGACACCCACCTGGAAGGCAACTCCAAC GCCGGCCACGACTTCGCCCGCGAGTACGACGAAAGCCAGCGCCTGGCGCTGCTCGAATACCTCAAGACCCTGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCGGCCCCGCCCACATGCCCAATAGAGAGAACCGCCCGATGACCCTATCGCGACTCAGCCTTGCCATCCTTTCCGTCCTCGCCGGTGCCCCGGCATTCG CCGACGACAGCGGCGTCGACCTCGACCAGGGCTGGAACCAGACCCAGAAGACCGCCTGGCTGGAAGCCGGCCAGGGCTCGCGGATGCTGCCGCTGGCCTG GCTGGTGGCGCTGGAGCAGCGCGCCAGCGAAGAACCGCTGATGTCCGACGCGCTGATCCGCCAGTACGGCTATGTCCCGCACACCCTCGGCGGTTCCAGC GTGAAGGTGGTGCAGGGCTACGCGGTCGACCGCAGCGACGACAGCGACCTGACCTTCACCAAGCTGCGCTGGAAAGCCCTGCAGGGCTCCAGGGAACCCT GGGTCGGACCGACCTGCAGCATGTGCCACACCTCGCACATCAGCTATCAGGGCACCCAGTTGACCGTCTACGGCGGGCAGACCATGGGCGACCTCGCCGG
|
|
Amino Acid Sequence |
>hypothetical protein
MHPTFSRVLLAAALASAGSPAVATEIQLEQGWNAEQRASWYDASLGSRLLPLAWAQALERPDSEERLFSEDNARRLGFPLRNWQGGELRLPRGFALDQQD DSQFSDTRLRWKARQSSSEPWVGLNCAGCHSTDISYRGSELTVDAGATLANVQAIFDEVLAALRRTSDDGDKFARFAGNVLGSEDSPANRDLLKAALAKR AALIDTLLSMSATDLQPGPGRLDATGQSLNRAAINSGARHLQANPTDAPTSFPALWHTLQMDKLQSSGFVPNVKVLDLNGQVFDLGYLAGDIGVVQGDYG DVVSHPLSGLEGYISSIRVDNLTRVEGLIHKLKAPAWPSQLFGAPDSARLAQGKRLYEENCAACHASIGRDDLQTPIKVRQVRLKAHGDDAPIGTDPWMA CNTFTFSSPSGNYFGLFRPSLGTPSGVGIVGRTSKIADMQVPEVFQIMLGKKGQLADGIAEIIHAIVTGQQTLPGSDSLQALPTGQLLLAGGDPAGSQAQ SLAAGEVPADKSARKDYCLNTEHPFLGYIARPLNGIWATAPYLHNGSVPSLYDLLLPQEQRPTTFYTGSHEFDPSRVGYLTGPGPDNAFLFDTHLEGNSN AGHDFAREYDESQRLALLEYLKTL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|