Pseudomonas aeruginosa AZPAE14989, NT04_RS00360

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14989 AZPAE14989_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCGCAGAAGGACGACGGCACCAAGGAAGGCACGGCCGCCTCGACCTGGGACCTGGCCGCCAACCAGTTGGTCAAGTGACCGGGCGCCGACATGTCCGGA GCCCTGCCGCCGCTGTTCGAGCGCCTCAGCGCCGAGGCCGACGAACGTCCCGCGTTCGACGACCGGGCGCTGGCCGAGTCGGTCCGCGGCGAGCTGCTGA GCCTGCTCAACACACGGCGCCCGGCGCATGCGCGCAGCGGCATCCTCGCCTACGGGCTCGCCGACTGGACCGCCGTGCAACGCCTGCGCGCCGAGGACCG GCGCCAGCTGGCACGCGAGGTGCGGGCGGCGGTCGAGCATTTCGAGCCGCGCCTGCAACTGGCCGAGGTCGAGGTCGAACCTGACCCGGACAATCCGCAG CGCCTGCGTATCCAGCTCGGCGGCCGCCTGCGCAGCGGGTCGCGCCTGATGCCTGCGCTATTCGTCATCGAACAGGGCAACGATGGCCTCGAGGTGCGCC
DNA Sequence for Gene
>NT04_RS00360
ATGAGCGATTCGATTGATGCCGACCTGCTCGACTACTACCAGCGCGAGCTGACCTGGCTGCGGCATGCCGGCGGCGCCTTCGCCGAGCGCTATCCGAAGG TCGCCCGGCGCCTGCAACTGGCCCCCGGCGAATGCCCCGACCCGCACGTCGAGCGTCTGCTGGAAGGCTTCTCGCTGCTCACCGCGCGCCTGCAACGGCG CCTCGACGACGACTACGCGGAGTTCAGCGACGCCCTCCTCGAACAGCTCTACCCCCTGGCGCTGCGCCCGCTGCCGTCCTGCACGATCGTCCAGTTCGAA CCGGACCCGACCCAGGGCAACCTCGCCGAGGGCTACCGGCTGCCGCGCGACACCGCACTGTTCGTCACCACCCGCGGCGGCGACAGCGTGCATTTCCGCA GCAGCGCCGAGGCGACCCTGTGGCCGCTGGCGATCGACGAAGCGACCCTGCTCGGCGGCGAGGAGGCGCAAGCCCTGACCGGAGTCGGCGCCGCCCGCTC GGCGTTGCGCCTGAGCCTGCGCTGCCTGGGCGAGTACCGCTGGGACGAACTGTCGATCGAGCGCCTGCGCATCCACCTGGCGGCTTCGCCGATGGGCTGT GCGATCCTCTACGACCTGCTCGCCGCGCATGCCGTGCAGGTCATGGCGGGGGCGCCCGGCACGCCGCCGGCGGCGCTCTGCGGACTGCCGGAGATCGTCG GCTTCGCCGCCGACGAGGCGCTGCTGCCGGAGGAAGACGGCGGACATCCGGGCCTGCGCCTGCTCGCCGAGTACTTCGCCTTCCCCGACAAGTTCCACTT CTTCGACCTGCCGCTGTCCGGCGCACTCGCCGACGGACAGACGCTCTACCTGTACCTGGTCTTCGATCGCGCACCGACGGCACGCCTGCATTTGCAGGCG GAAGACTTCCAGCTCGGCTGCGCGCCGGCGATCAACCTCTTTCCGCGGACCTCGGAGCCGCTGCGCCCGGACGGCACCCGCAGCGAGTACCGCCTGGTCG CCGACAGTCACCGCGAGAACAGCGTGGAAATCCATAGCATCCGCGCCGTGCGCTCGGTTGCCGGGAGCACCGTGCAGCCAGTCCCGGCCTACTATGGCTG CCGCCACGACAGCCACCTCGGCACGCTCTACTGGCACGCCCGGCGCATCGCCAGGCTGACCCCGAACCGGCTGGGCAGCGACCTGCTGCTGAGCCTGGTG GATACCGGCTTCGACCCGTTGCGCGAGGCCCCGGCCTTCAGCCTGACCGCCGAGCTGCTATGCACCAATCGCTATCTGGCCGAGCGCCTGGGTGCCGGCA CCGCGCTGGGCTTCGAACGGCCCGGGCCGGTCGCCGCCGCACGCCTGCGCAACGCACCCAGCGCGCAGAGCCAGCCGCGCCTGGACGGCCAGTCGCGCTG GAGACTGGTCTCGCAGCTGACCCTCAACCACCTCTCGCTGGTGGAAGGCCCGCGCGCCCTCGAAGCCCTGCGGGAAATCCTCGCCCTGCACAACCTGCGC GACGACGCCAGCGCCCGCCGGCAGATAGAAGGCCTGAGGCAACTCGACTGCCAGCGGGTGGTGGCGCACGTCGGCGAGGATGCCTGGCGCGGCTGGCGCA ATGGCCTGGAAATCCGCCTGCGACTCGATCCGCAACACTTCGTCGGCGCCAGCGGCGTGCTGTTCTCCGCCGTGCTGGCGCAGTTCTTCTCGCTGTATGC CACCGCCAACCGCTTCGTGCGCACGGTCCTGGTGGAAGCCGACAAGGAGGTGAAGACATGGCAACCCCAGGCCGGCTCGCCGCTCTCCCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCAACGGCTGCGCCGCACGCCGCAGCGCTTCGAACTGTTGCAGGCGCTGCTGCTGCTCGAACGCGAGCGTCCCCAGGCGTTGCCGCTGGGCACCGGCAA CGCGCCGCGGGCGGAGGCCCTGCGCCTGCGCGGGCCGCTGCTGCCGCTGTTCGCCTCGAGCGAGGTGGAAAGCCTGCTCGACGACCCGCAGCAACCGGTG CTGTCCACCCCGGTGTTCGGCCTCGGCGGCCCCGACGGCCCGTTGCCCTATGCCTACCAGGAATGGCTGCAACAACGCGCCCGGCAGAAGGACCATGCCC CCGCCGAGTTCCTCGACCTGTTCCAGCACCGCCTGCTCAGCCTGCTCTACCGGGTGCTGCGCAAGCATCGCGTGGCGCTCGGTTTCACGGTGCCGGCGGC GACCCCGGTGCAGGCGCAGCTACGCGCCCTCAGCGGCCTGTTGCCGAAGGCCCTGCAAGAGCGCCTGGCGCTGCCGGACAGCGCGGTGCTGGCACGCACC
Amino Acid Sequence
>type VI secretion system protein ImpG
MSDSIDADLLDYYQRELTWLRHAGGAFAERYPKVARRLQLAPGECPDPHVERLLEGFSLLTARLQRRLDDDYAEFSDALLEQLYPLALRPLPSCTIVQFE PDPTQGNLAEGYRLPRDTALFVTTRGGDSVHFRSSAEATLWPLAIDEATLLGGEEAQALTGVGAARSALRLSLRCLGEYRWDELSIERLRIHLAASPMGC AILYDLLAAHAVQVMAGAPGTPPAALCGLPEIVGFAADEALLPEEDGGHPGLRLLAEYFAFPDKFHFFDLPLSGALADGQTLYLYLVFDRAPTARLHLQA EDFQLGCAPAINLFPRTSEPLRPDGTRSEYRLVADSHRENSVEIHSIRAVRSVAGSTVQPVPAYYGCRHDSHLGTLYWHARRIARLTPNRLGSDLLLSLV DTGFDPLREAPAFSLTAELLCTNRYLAERLGAGTALGFERPGPVAAARLRNAPSAQSQPRLDGQSRWRLVSQLTLNHLSLVEGPRALEALREILALHNLR DDASARRQIEGLRQLDCQRVVAHVGEDAWRGWRNGLEIRLRLDPQHFVGASGVLFSAVLAQFFSLYATANRFVRTVLVEADKEVKTWQPQAGSPLSL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site