Pseudomonas protegens CHA0, PFLCHA0_c61440 (pyrC3)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens CHA0, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACGGCCATCATCTGCGGCAAGGTGGTGATCGGCGACAACGTCTTCGTCGGCCCCTACGCGGTGATCCGCGCCGACGAAGTGGACGCCAGCGGCCAGATGC AAGCCATCACCATCGGCGCCAACTCGAACATCCAGGATGGCGTGGTGATCCACTCCAAATCCGGCGCGGCGGTGACCATCGGCCAGCACACTTCCATCGC CCACCGCTCCATCGTCCATGGCCCCTGCGTGGTCGGCGACCGAGTGTTCATCGGTTTCAACAGCGTGCTGTTCAACTGCGAAGTGGGCGACGGCAGCGTG GTTCGACACAACTCCGTGGTGGATGGCCGCGACCTGCCGCCGGGTTTCTACGTGCCCTCCACCACCCGCATCGGGCCCAAGACCGACCTGGCGCAGTTCC CTCCCGTGAGTGTCAGCGCTTCGGAGTTTTCCGAAGACGTGGCGCGCACCAACGTCGACCTGGTGCGTGGCTACAAGGCCCTGCAGAACGAGTTTTGAGC
|
|
| DNA Sequence for Gene |
>PFLCHA0_c61440
|pyrC3
ATGAGCCGAATCCTCATCCGCAATGCCCGCCTGGTGAACGAAGGGCGCGAATTCGACGCCGATGTGCTGGTGGCGCACGGGCGCATCGACACCATCGGCA GCCTGGACCACCTCAGCGCCGAGATCGAAATCGACGCCCGCGGCCAGTGGCTGCTGCCGGGCATGATCGACGACCAGGTGCACTTTCGCGACCCCGGCGC GCCGGACAAGGGCAGCCTGTACAGCGAGTCGCGGGCGGCGGTGGCCGGTGGCATCACCAGCTTCATGGACATGCCCAACACCTCGCCGGCGACCCTGGAT CTTGCCGCCCTGAACGACAAGAAGCGCCGCGCAGCGAGCGTTTCGGTGGCCAACTATGGCTTTCACTTCGGGGTCAGCAACGACAACCTCGACCTCGTCG CCGCCCTGGACCCCACGGAGGTGGCCGGGGTCAAGGTGTTCATGGGGGCCTCCACCGGCAACATGCTGGTGGACGATCCCGAGGTGCTGGACCGGCTGTT CCGCCAGGTGCCGACCCTGCTCCTGGCCCACTGCGAACACACCCCCAGCATCCAGGCCCGGCAACAGCGCTGGCTGCAACTCTATGGCGAGCAGATTCCC GCCGCCGCCCACCCGCACATCCGCGATGCCGAGGCCTGCTTTCGCTCCTCATCCCTGGCGGTGGAACTGGCGAAGAAACACGGCACCCGCCTGCACGTGC TGCACCTGACCAGCGCCCGGGAACTGGCGCTGTTCGAGGACCGGCCCCTGGCGCAAAAGCGCATCACCGCCGAGGTCTGCGTACATCACCTGCTGTTCGA TGACCGCGACTACCCGCGCCTCGGCCACCTGATCAAATGCAACCCGGCGATCAAGACCCAGGCCGATCGCGATGCCCTGCGCCAGGCCCTGAACAGCCAG CGCCTGGATGTCATCGGCACCGACCACGCGCCCCATACCTGGGAGCAGAAACAGCTGCCTTACAGCCGCGCGCCCTCCGGCCTGCCGCTGGTGCAGCATG CATTGCCAGCGCTGCTGGAACTGGTGGCCGACCGGGTGCTGCCCCTGACCACCCTGGTGGAAAAAACCAGCCACCGAGTCGCCGACCTGTTCGCCATTCC CGATCGCGGCTACCTGCGCGAAGGCTACTGGGCCGACCTGGTGCTGGTCCGCGCCGAGCCCACAGGCCTGGCCGTGGACAGCCAGCCAATCCTCGCCCAC TGCGGCTGGACGCCCTTTGCCGGCCAGCGCTTTCGCCACAGCGTCAGCAGCACCCTGGTGTCGGGCCAGCTCGCCTGGCACCAGGGCCGCCTGTACGACG ACTGTCAGGGCCTGCCCCTGCGCTTCACCCGTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TAGCCCGACCCCAAGGACCGCCGAAGATGATCCGCATCACCCTGCCTGATGGCGCGTGCCGTGAGTACGACCAGCCGTTGTCCGTTTTCGAGGTGGCCGC CAGCATCGGCAGCGGCCTGGCCAAGGCCGCCGTGGCCGGGCGAGTGAACGGCCAACTGGTGGACTGTGACTACCTGTTGCACAGCGACGCCCGCTTGAGC ATCGTCACTGCCCGCGACCCCGAGGGCCTGGAAGTACTGCGCCACTCCTGCGCGCACCTGCTGGCGATGGCGGTGAAACAGCTGTTCCCCTCGGCGCAGG TGGCCATCGGCCCGGTGATCGAGGATGGCTTCTTCTACGACTTCGCCTACGAGCGCCCCTTCACCCCAGAGGACCTGGAACTGATCGAGGCGCGCATGCA TAGCCTGGCCGCCACCAATCATTCGGTGCGCCGCCGGGAATTGTCCCGGGAGCAGGCCCTGCAGCATTTCGCCGACCTGGGCGAGCACTACAAGGTCGAG
|
|
| Amino Acid Sequence |
>dihydroorotase PyrC
MSRILIRNARLVNEGREFDADVLVAHGRIDTIGSLDHLSAEIEIDARGQWLLPGMIDDQVHFRDPGAPDKGSLYSESRAAVAGGITSFMDMPNTSPATLD LAALNDKKRRAASVSVANYGFHFGVSNDNLDLVAALDPTEVAGVKVFMGASTGNMLVDDPEVLDRLFRQVPTLLLAHCEHTPSIQARQQRWLQLYGEQIP AAAHPHIRDAEACFRSSSLAVELAKKHGTRLHVLHLTSARELALFEDRPLAQKRITAEVCVHHLLFDDRDYPRLGHLIKCNPAIKTQADRDALRQALNSQ RLDVIGTDHAPHTWEQKQLPYSRAPSGLPLVQHALPALLELVADRVLPLTTLVEKTSHRVADLFAIPDRGYLREGYWADLVLVRAEPTGLAVDSQPILAH CGWTPFAGQRFRHSVSSTLVSGQLAWHQGRLYDDCQGLPLRFTR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|