Pseudomonas protegens CHA0, PFLCHA0_c60470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
GCGCAACCGCGCGCCCCGGGTGCAGATCGAGTACGACGTCGAACTCTACGGCGCCGAGAAAAAGGTCCAGCTGCCCTTCGTCATGGGCGTGATGGCCGAC CTCGCCGGCAAGCCCGTGGAGCCCCTGGCGGCCGTGGCCGATCGCAAGTTCCTGGAAATCGACGTCGATAACTTCGACTCGCGCCTCAAGGCCATGCAGC CTCGGGTGGCCTTCCACGTGCCCAACGAACTGACCGGCGAAGGCAACCTGAGCCTGGACATCACCTTCGAGAGCATGGACGACTTCAGCCCGGCGGCCGT GGCGCGCAAGGTCGATTCGTTGAACCAGTTGCTGGAAGCCCGCACCCAGCTGGCCAACCTGCTGACCTACATGGACGGCAAGACCGGCGCCGAAGAAATC ATCATGAAAGCCATCAAGGATCCGGCGTTGCTCCAGGCCCTGGCCAGTGCGCCAAAGCCTGCTGACTCCGAGCCGAACGCGTAAATCAGGACCAACGATC
DNA Sequence for Gene
>PFLCHA0_c60470
ATGACCGAATTGATGCGTGACAATCAGGCGCAACCCGGCGCCACCGAGCAGGCCAGCGAATTCGCATCGCTGCTGCTGCAGGAATTCAAGCCCAAGACCG AGCGTGCTCGCGAAGCCGTGGAAACCGCGGTGCGGACCCTGGCCGAACAGGCCCTGGCGCAGACCGACCTGGTGTCCAACGACGCCATCAAGTCGATCGA GTCGATCATCGCCGCCATCGACGCCAAGCTCACCGCCCAGGTCAACCAGGTGATCCATCACCCGGAATTCCAGAAGCTGGAAAGCGCCTGGCGCGGCCTG CACTACCTGGTGAACAACACCGAGACCGACGAGCAGCTCAAGATCCGCGTGCTCAACATCTCCAAGCCGGAGCTGCACAAGACCCTGAAGAAATTCAAGG GCACGGCCTGGGACCAGAGCCCGCTCTTCAAGAAGATGTACGAAGAGGAATACGGCCAGTTCGGCGGCGAGCCTTACGGCTGCCTGGTGGGCGACTACTA CTTCGACCAGTCGCCACCGGATGTCGAGCTGCTGGGCGAGCTGTCCAAGGTTTGCGCCGCCATGCACTCGCCGTTCATCGCCGCGGCTTCGCCGACCGTG ATGGGCATGGGCTCGTGGCAGGAACTGTCGAACCCGCGCGACCTGACCAAGATCTTCACCACCCCGGAATACGCCGGCTGGCGCTCGTTGCGTGAATCGG AAGACTCGCGCTACATCGGCCTGACCATGCCGCGCTTCCTGGCGCGCCTGCCATACGGCGCCAAGACCGACCCGGTGGAAGCCTTCGCCTTCGAGGAAAA CACCGACGGCGCCGACAGCTCCAAGTACACCTGGGCCAACGCCGCCTACGCCATGGCCGTGAACATCAACCGTTCGTTCAAGCATTTCGGCTGGTGCTCG CGGATCCGCGGCGTGGAGTCCGGCGGCGAGGTGGAAAACCTCCCGGCCCACACCTTCCCCACCGACGACGGTGGCGTGGACATGAAGTGCCCGACCGAGA TCGCCATCTCCGACCGTCGTGAAGCGGAACTGGCGAAGAACGGCTTCATGCCACTGCTGCACAAGAAGAACACCGACTTCGCCGCCTTCATCGGCGCCCA GTCGCTGCAGAAGCCGGCCGAATACGACGACCCGGACGCCACCGCCAACGCCAACCTGGCCGCGCGCCTGCCGTACCTGTTCGCCACTTGCCGCTTCGCT CACTACTTGAAGTGCATCGTGCGCGACAAGATCGGCTCCTTCAAAGAGAAGGACGAGATGCAGCGCTGGTTGCAGGACTGGATCCTCAACTACGTCGACG GTGATCCGGCGCACTCCACCGAAACCACCAAGGCCCAGCACCCACTGGCCGCGGCGGAAGTGGTGGTCGAGGAAGTCGAAGGCAACCCCGGCTACTACAA CTCGAAGTTCTTCCTGCGCCCGCACTACCAGCTCGAAGGGCTGACCGTGTCGTTGCGCCTGGTATCCAAACTGCCGTCCGCCAAGGGCGCCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCATAACCGACTCAAACCTGCGGCCGCAGCCACAGGCCGCGCGAGGTCCACAGGGCCTCGCGCAGCGGCGACAGAAGCTGAATCAACATCGTGGCAAGT GCCACACAGGGAGAAAACATGGCTGTTGATATTTTCATCAAGATCGGTGACATCAAGGGCGAGTCCATGGACAAAGCCCACAAGGACGAAATCGACGTGT TGAACTGGAGCTGGGGCATGTCCCAGTCCGGCAACATGCACGTTGGCGGTGGCGGCGGCGCGGGCAAGGTGAACATCCAGGACCTGTCGCTGACCAAGTA CGTGGACAAGGCATCGCCGAACCTGATGATGCATTGCTCCAGCGGCAAGCACATCGACAAGGTGCGCCTGACCGTGCGCAAGGCCGGCGGCGAAAGCCAG GTCGAGTACATGATCATCGACCTGGAAGAAGTGCTGATCACTTCGCTGAGCACCGGCGGTTCGGGCAGCGATGACCGCCTGACCGAAAACATCACCCTGA
Amino Acid Sequence
>hypothetical protein
MTELMRDNQAQPGATEQASEFASLLLQEFKPKTERAREAVETAVRTLAEQALAQTDLVSNDAIKSIESIIAAIDAKLTAQVNQVIHHPEFQKLESAWRGL HYLVNNTETDEQLKIRVLNISKPELHKTLKKFKGTAWDQSPLFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGELSKVCAAMHSPFIAAASPTV MGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIGLTMPRFLARLPYGAKTDPVEAFAFEENTDGADSSKYTWANAAYAMAVNINRSFKHFGWCS RIRGVESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFA HYLKCIVRDKIGSFKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVVVEEVEGNPGYYNSKFFLRPHYQLEGLTVSLRLVSKLPSAKGA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site