Pseudomonas protegens CHA0, PFLCHA0_c57810 (pilH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
CGGACCAAATCATTCGCTGGGGCGATGGCAGAGCAGATATGGAACAGCATTCCAACGCCTTGAAGGTGATGGTGATCGACGATTCGAAGACGATTCGCCG CACGGCCGAAATGCTGCTGAAGAACGTCGGTTGCGAGGTCATCACCGCAGTGGACGGCTTCGAAGCCCTGTCGAAGATCGTCGACCATCACCCCGGCATC ATCTTCGTCGACATCATGATGCCGCGGCTCGACGGCTATCAGACCTGTGCGCTGGTGAAGAACAACAGCGCGTTCAAGTCCATCCCGGTGATCATGCTGT CTTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTTTTTGACCAAACCCTTCAGCAAGGAAGAACTGCTGAGCGCGAT CAAGGCCCATGTCCCGGACTTTGTCGCGCTTGCGCCACAGTAGACACGCACAGCGACGCCCGGCCAGCAGGCCGCGCGCCTATACCGTATGGGGAAGACC
DNA Sequence for Gene
>PFLCHA0_c57810 |pilH
ATGGCTCGTATTCTGATCGTCGATGACTCGCCGACTGAAATGTACAAACTCACCGGCATGCTGGAAAAGCACGGCCATGAAGTGCTCAAGGCCGAGAACG GTGCCGACGGCGTGGCCCTGGCCCGGGAAGAAAAGCCCGACGCGGTGCTGATGGACATCGTCATGCCCGGCCTCAACGGTTTCCAGGCGACCCGCCAGTT GACCAAGGATGCCGAGACCAGCCATATCCCGGTGATCATCATCACCACCAAGGATCAGGAAACCGACAAGGTCTGGGGCACCCGCCAGGGCGCCAAGGAC TACCTGACCAAACCGGTGGACGAAGAGACCCTGATCAAGACCCTGAACAACGTCCTGGCCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAGCCGCGCCATGAGCCAATCCCAGACCGCCTTCGAGCTGCTGCTGGAGATCGACCAGCGCTGCCGCTTGCTGGCCGCCGACCTGCCGTCCCAGGAAACC CGCCAGCACAGCTGGAGCGGCATCGGCTTTCGCCTGGGCGAGCATTGGTACGTGGCCGCCATGGGCGAGATCAGCGAAGTCCTGCACGAGCCGCGCTACA CCCTGCTGCCCGGGGTCAAGCCGTGGGTCAAGGGCGTAGCCAACCTGCGCGGGCGGCTGCTGCCGATCATGGACCTGTGCGGTTTCTTCGGCCATGAGCT GTCGCCCCTGCGCAAGCAGCGACGGGTGCTGGTGGTGGAGTACAAGGAGCTGTTCGCCGGCCTGCTGGTGGACGAGGTGGCCGGGCTGCAGCACTTTGCC CAGGACAGCCTGGAGCCCGGCATCACCGACTTTGCCGACGCCGCGGTCAACCCCTACCTGCAGGGCCAGTTCCGCCGCGATCAGGTCTGGCAGGTCTTCA
Amino Acid Sequence
>protein PilH
MARILIVDDSPTEMYKLTGMLEKHGHEVLKAENGADGVALAREEKPDAVLMDIVMPGLNGFQATRQLTKDAETSHIPVIIITTKDQETDKVWGTRQGAKD YLTKPVDEETLIKTLNNVLAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site