Strain | Pseudomonas aeruginosa strain AZPAE14996 AZPAE14996_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGAGGCCGGGATAACCGTCCTCGCCGATGCCCACCAGGGTCAGCCAGGGCGGCGTCGAGTCTGCCGATGACACGGTTCCGATACTCCTGAAATGCGTCT GTGAAGGGCCCGCGACGGCTTCCGGACGGAATGGGTTTTCCCGGCCCCGGGCTGGGCGGCATAATAGCGCGTTCGTCGGTGCCCGGCCCTTTCGCGTTAG CGCGGGGCCAACGAGGGCCGAAGAGGGAACACGGAGCCGCGGTCTTTTCGAAGCCCGGGCCTAGCCGTGGCTGCCCCCGCAACTGTATGCAGCCTGTATT CGCGCCATTCGCCACTGGATTACCGGGAAGGCGGCGCGAAGCGGAGGTTCCTCCCCCGGGTGGAACGCCGGGCTGCGAGCCAGGAGACCTGCCGCCGAAA CCAGTCGCGAGTGCCAACATCGGGCGGGGTGTACCGATGCCGTGGTCTGTCCCTGGGGGACAGCGGTGCGGTCGCCGCGACGCCGATTCGAGTAGCGTTT
|
|
DNA Sequence for Gene |
>NT11_RS03340
TTGAACGACGACCAGACCCCGGCGCCCCTGCCCGTACCACGTCCGTCACCCTGTCCCGGCCTGCTGCGTATCGTCCAGGCGCTGGACGGCGGCATCTGCC GCATCAAGCTCGATGCCGGTCGCCTGGACGCCGCCCAGGCACGCGCCGTGGCGGCCGCGGCGCGGGATTGCGCCAGCGGCGTGATCGAGGCGACCAACCG TTCCAACCTGCAATTGCGCGGCGTCCGTCGCGGCGAGGAAGAGCGGCTCGTCCGCCGCCTGCTGGACGCCGGCCTCGGTCCCCGGCATGGGGCCCTGGCC GGCGCCGACGACGTGCGCAACCTGATGCTCAGCCCGGCCGCCGGGCTCGATCCGCACCTGTCGCTGGACGTGCGCCCGCTGGCCACGCGGTTGCTGCTGC GGCTCCAGGCGGACAGCCGCTACCACGCGCTGTCGGCCAAGTTCGCCATCCAGCTGGACGGCGGCGAAGACCTGGCGATGCTCGAACATCCCCATGACAT CTGGCTCTCGCCGATGCCCGCGGCGCCGACCGCGACGCTGGTCTTCGGACTCGCCGGCTGCCCGGCCCGCGACCGCCCCCTGGCGGCGTTGCCGGCGGAG CGGGGCGAGTCCCTGGTGCTGGCGCTGCTCGACCTGTTCCTCGAACGCGCCCAGCCGCAACAGACGCGGATGCGCCACCTGTTGCAGGAGCTGGCCGGAG AACCCTTGCTGGAGGCCTTGCAGGCGCGCCTGGATTTCCCTCTGCGGCGTGACGAGCGGGTGGCGGCCTGGCAGCGTCCGCCGGGGCGTGCGTGGAGTCA TCTCGGCGTCCAGCCACAACGCCAGCCGGGCCTGGTGATGGTCGGCGCGGCGGCGCCGCTCGGCCGGCTCGACAGCGCTTGCCTGGAAGGCCTGGCCGAG CTGGTCGAACGCCATGGCGACGGCAGCCTGCGCCTGACCCCCTGGCAAGGCGTGCTCCTGCCGAACCTGGCGCACGCCGAGGCCGACCAGGCGCTGCTCG GCCTGCGCGGACTCGGCCTGCTGACCGAGCCCGATGCGCCGTTGGCGCGGCTGATCGCCTGCAGCGGTTCCAGCGCCTGCGCCAGGGGCCTGGCCGACAC CAAGGGCGACGCCTTGCGCCTGGCCGAACGCCTCGGCCCGCGCAGCGACCTGCCGCAACTGCACCTGTGCGGCTGCGAACGGTCCTGCGCCGCCGCCCAC CGCGCGCCGCTCACCCTGCTGGCGCGCAGCGGCGGGTTCTACGACCTGTACCGGCACGACCCATGCCACCCCGGATTCGGCCAGTTGCTGGCCAGCCGCC TGACTTTTGCCACGGCCGCCGACTACCTGGCGGCCCTGCCTTCCCAGCCCACTTCCGGAAAACCCGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TTGACTACATCCGCGATGGCCAGGCGATCTATCGCCAGTCGTTCGCCACCATCCGCGCCGAAGCGAACCTCGCCGGCATCCCGGCCGACCTGGAAAAGCT CGCGGTCAGGGTGATCCACGCCTGCGGCATGGTCGACGTGGTCGACGACCTGCGCTTCTCGCCCGGCGCCGGCGCCGCCGGCCGCGCCGCGCTGGCCGCC GGCGCGGCGATCCTCTGCGACGCGCGGATGGTCGCCGAAGGCGTGACCCGCTCGCGGCTGCCCGCCGCCAACCGGGTGATCTGCACCCTCAACGAAGCGG ACGTGCCGGCGCTCGCCACGGAACTCGGCAATACCCGCTCGGCGGTGGCCCTGGAGCACTGGCGCGAGCACCTGGAGGGCAGCGTGGTGGTGATCGGCAA CGCGCCGACCGCGCTGTTCTACCTGCTGGAAATGCTCGACGCCGGCGCGCCGAAACCGGCGCTGATCCTGGGCTTCCCGGTCGGCTTCGTCGGCGCCGCG
|
|
Amino Acid Sequence |
>precorrin-3B synthase
MNDDQTPAPLPVPRPSPCPGLLRIVQALDGGICRIKLDAGRLDAAQARAVAAAARDCASGVIEATNRSNLQLRGVRRGEEERLVRRLLDAGLGPRHGALA GADDVRNLMLSPAAGLDPHLSLDVRPLATRLLLRLQADSRYHALSAKFAIQLDGGEDLAMLEHPHDIWLSPMPAAPTATLVFGLAGCPARDRPLAALPAE RGESLVLALLDLFLERAQPQQTRMRHLLQELAGEPLLEALQARLDFPLRRDERVAAWQRPPGRAWSHLGVQPQRQPGLVMVGAAAPLGRLDSACLEGLAE LVERHGDGSLRLTPWQGVLLPNLAHAEADQALLGLRGLGLLTEPDAPLARLIACSGSSACARGLADTKGDALRLAERLGPRSDLPQLHLCGCERSCAAAH RAPLTLLARSGGFYDLYRHDPCHPGFGQLLASRLTFATAADYLAALPSQPTSGKPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|