Strain | Pseudomonas aeruginosa strain AZPAE14996 AZPAE14996_contig_49, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAAGACCGCCAGCGCGGTGATGACCTTCGCCCTGCTGGCGTACATGCTGATGCAACCGCTGTTCGGCATGCTTTCCGATCGCATCGGGCGCAAGACCTCG ATGCTCTGGTTCGGCACCCTGGGCACGCTCTGCACCCTGCCGATCCTGCTCGCGCTGAAAACCGTGAGCAGTCCCTACATGGCCTTCTTCCTGATCATCC TGGCGCTGGCCATCGTCAGCCTGTACACCTCCATCAGCGGCCTGATCAAGGCCGAGATGTTCCCGCCGGAGGTGCGCGCCCTCGGCGTCGGAGTGTCCTA CGCGGTGGGCAACGCGATCTTCGGCGGCTCGGCCGAGTACGTCGCCCTGGGGCTGAAGTCGGTAGGGATGGAGAACGTCTTCTACTGGTATGTTTCAGCC ATGTGCCTGCTGGCGCTGCTGGTCTGCGTGAGCCTGCCGGACCTGCGCAAGGTCAGCTACCTGAACGACGAGCCCTGACGGGCCGGGAAAAGGAAAACCG
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DNA Sequence for Gene |
>NT11_RS29325
ATGAGCGACGTACCCGCCAACCAGTTGTTCGATGCCTATTTCACGGCGGCGCCGATGCGCGCGGTGTTCTCCGACCGCGGCCGCCTGCAAGGCATGCTCG ACTTCGAGGCCGCCCTGGCCCGCGCCGAGGCGCGCACCGGGGTGGTTCCCGCGACGGCGGTGGCGCCGATCGAGGCGGCCTGCCGCGCCGAACTGTACGA CCCGCTGGCGCTGGCCGAGGCGGTCGCCACTGCCGGCAACTCGGCGATCCCGCTGGTCAAGGCGCTGGGCCGCCAGGTGGCGGCTGGCGACGCCGAGGCC GAGCGCTACGTGCATCTCGGCGCCACCAGCCAGGACGCCATGGACAGCGGCCTGGTGCTGCAACTGCGCCGTGCGCTGGCCTTGCTCGAGCAGGATCTGC AACGTCTTGCCGAGGTCCTGGCGGACCAGGCCGAACGGCATGCCGACACGTCGCTGGCCGGGCGCACCTGGTTGCAGCACGCCACCCCGGTGACCCTGGG CATGAAGCTCGCCGGCCTGCTCGGTGCCTTGACCCGGCACCGCCAGCGCCTGCGCGAGTTGCGCCCGCGCCTGCTGGTGCTGCAATTCGGCGGCGCCTCG GGGACGCTCGCCGCGCTCGGCGAACAGGCCCTGCCGGTGGCCGCGGCGCTGGCCGAGGAGCTGGGCCTGGCTTTGCCCGAACAACCCTGGCACACCCAGC GCGACCGCCTGGTGGAATTCGCCAGCGTGCTCGGCCTGGTGGCCGGTAGCCTCGGCAAGTTCGGTCGCGATGTCAGCCTGCTGATGCAGACCGAGGCCGG CGAGGTCTTCGAGCCGGCCGGCGCCGGGCGCGGCGGTTCCTCGACCATGCCGCACAAGCGCAACCCGGTGAGCAGCGCGGTGCTGATCGCCGCCGCCACC CGTGCGCCGGGGCTGGTCTCGACCCTGTTCGCGGCGATGCCGCAGGAACACGAGCGCAGCCTCGGCCTCTGGCACGCCGAGTGGGAAACCCTGCCGGAAC TCTGTTGCCTGGTTTCCGGCGCGCTGCAACAGGCGATCGGCCTGCTCGAAGGCCTGGAGGTGGACGCCCAGCGGATGCGCCGCAACCTTGGCCTGACCCA CGGCCTGGTGCTCGCCGAGGCGGTGAGCATCGCCCTGGCCCGCCGTATCGGCCGCGAAGCCGCGCACCATCTGGTGGAACAGTGCTGCCGCCGCGCCGTC GAGCAGCGCCGCGAGTTGCGCGCGGTGCTCGGCGAAGAGGCGCGGGTGAGCGCCGAGTTGTCCGGCGACGAACTGGACCGCCTGCTTGATCCCGCCCATT ACCTCGGCCAGGCCCGCGCCTGGGTCGAGCGCGCGCTCGCCGAACACCATGCCCTGGGCTTCGAACCCCATCCCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTGGAGATCCCCTTCGTGCCAACCGTACGCCTCGCCGACGGCGACCTGAACTACTCCCTGGAAGGACCGGCCGGCGCGCCGGTCCTGCTGTTGTCAAACT CGCTGGGCACCGACCTGGGCATGTGGGACACGCAGATCCCCGCACTCACCGCCCATTTCCGCGTGCTGCGCTACGACACCCGCGGCCACGGCGCCTCGCT GGTCACCCCCGGACCGTACGCCATCGGCCAGCTCGGCGCCGACGTGCTTGCCCTGCTCGATGCCCTCGAGCTGCCGCGCGTGCATTTCTGCGGGCTGTCC ATGGGCGGCCTGATCGGCCAGTGGCTGGGCATCCACGCCGGCGAGCGGCTCGGCCGGCTGGTGCTGTGCAACACCGCGGCGAAGATTGCCAGCGACGAGG TCTGGAACACCCGCATCGATACCGTCCTGAAAGGCGGCGAGCAGGCCATGCGTGACCTGCGCGACGCCTCGGTGGCGCGCTGGTTCACCGCGGGCTTCGC
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Amino Acid Sequence |
>3-carboxy-cis,cis-muconate cycloisomerase
MSDVPANQLFDAYFTAAPMRAVFSDRGRLQGMLDFEAALARAEARTGVVPATAVAPIEAACRAELYDPLALAEAVATAGNSAIPLVKALGRQVAAGDAEA ERYVHLGATSQDAMDSGLVLQLRRALALLEQDLQRLAEVLADQAERHADTSLAGRTWLQHATPVTLGMKLAGLLGALTRHRQRLRELRPRLLVLQFGGAS GTLAALGEQALPVAAALAEELGLALPEQPWHTQRDRLVEFASVLGLVAGSLGKFGRDVSLLMQTEAGEVFEPAGAGRGGSSTMPHKRNPVSSAVLIAAAT RAPGLVSTLFAAMPQEHERSLGLWHAEWETLPELCCLVSGALQQAIGLLEGLEVDAQRMRRNLGLTHGLVLAEAVSIALARRIGREAAHHLVEQCCRRAV EQRRELRAVLGEEARVSAELSGDELDRLLDPAHYLGQARAWVERALAEHHALGFEPHPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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