Pseudomonas aeruginosa AZPAE14996, NT11_RS29110

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14996 AZPAE14996_contig_49, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGTCCTCCCACTGGTCGTGGGCGCGTACCCGGCGTACCTGTTCGGGCGTGCGCAGGCGTTGCGCCTCCAGCACCGCGCCGAGATCGGCGACGGCCGCAGC CGAGTCCGCCGCCGGCGGCGGCGGGAGGTAGTCGGCCAGGCGCGGTGGGTGGGCCAGCGGATAGGGCGCGGCGGCGGTCTCCCCGAGACAAGACAGCGGT GCAAGCAGCGAAAGGCAGAGCAAGAGCGAAGGGCATAGGGTCTTGTTGTTCATGAAGCGTATTCCCTGAGGCGAGGTTGCATCGGGAGCCTAGGCTCCCA CCCACGGCCGTTGCGGATGACGGCCGACGCCACACTCTCCGTCGGTGACTTCCGAAATGCTTGACCCGGCCTGCCGTTGCACATGCCAGCCCCTGCCAAT GGCAGGCCCCGGCAAAAGCCGAGGCAGGGAAACACAAGCGGCCTGCGGAGCGACTTCCGAGACTGCGCCCACCTGGCACTCAGGTGGGAGAAAACAATAA
DNA Sequence for Gene
>NT11_RS29110
ATGCAAAATCTCAGACGCGCTGTATTCGCCGGCCTGGTCGCCGGCACGCTTTCCGAAGGGGCGGCCGCGACGGCCGGGGATGGGGGCTTCGTCGAGGACA GCGAACTGCAGTTCCTCGCTCGCACCTACTACTTCAACCGCGACTACCGCGACAGCCCGAACAACGCCGGGCGCAACCGCTTCAAGCCCAGGAGCGAGCG CAACGGCTACCGCGAGGAAGCCACCCAGGGCCTGCGCCTCCAGTTCGCCTCCGGCTACACGCCGGGCAGCCTCGGCTTCGGCCTCGACGCCCATGCCATG CTCGGCCTGCAACTGGACAGCGGCGGCGGCCGCACCGGCACCGGCAACCTGCCGGTCGGCGCCGACGGCCATCCCGACCATCGCTACGGCAAGGTCGGTG GCGCCCTCAGGCTACGCCACGGCGAAACCCGCCTGAAGTACGGCCAGACCACCACCAGCGCGCCGGTGTTCGCCGCCAGCAGCAACCGCACGCTGACCGG CATGGCCTACGGCCTGCTGCTGGAGGACCGCTCGTTCGACGGGCTGCTGCTCGAGGGTGGGCGCTTCACCGCCGCCTCCGGCCCCGGCGAATCCAAGGTC CGCGGCGACATCAGCACCGTCTACGGACGCCTCGGCGCCTATCCGGTGCGCCTCGACGCGGTCGGCTTCCTCGGTGGTCAATGGCAGGCCACGGAGCGGC TGCAACTGTCGCTCTACGCCTCGCGCTTCGACGACATCTGGCAGCAGGCCTATTTCGGCGCCAGCCATCGCCAGCCGCTGGGCGGGGAGCGCGCGCTGCG GGTCGACCTCGACGCCTACCGCTCCCGCGACAGCGGCCAGAGCCGCTTCGGCCGCATCGACACCCTGGCCAGCTCCCTGGCCCTGGGCTACGAACAGGGG CCGCAGCGCATCACCCTGGCCTACCAGCGTGTCCATGGCGAGCAGCCGTTCGACTACATGGCCTTCGGCGACGGGCGCTCCAGCGCGTCCATGGTACTGG CCAACTCGGTGGGCTACTCCGACTTCAACGGACCGGGCGAGCGTTCCTGGCAATTACGCTATGACCTGGACCTCGGCGCGCTCGGCCTGCCTGGGCTCAG CCTGCATGCGCTGCATGCCCGCGGCCGTGCCGGGGCCAGCGCCAGCAGTGCCGCCGAGAGCATCTACGCCGGACTCTACGGGCGTGACGGGCAGCACCGG GAAAGCGACCTCGGCTTCGCCTATCGGGTCAAGGCGGGCCCCCTCGCCGGCCTCGCGCTGCGCGCCTCGCAGGCCTGGCACCGGGGCAACGCGAGCTATC TCGACGGCGACATCGACGAAACCCGGCTGGTCGTCGATTACTCCCGCTCGATCTGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCCCGGGCCGCCCCGCGGGGCGGCCCGGATCGTCTTCACGCGCGCGGCAGCAACTGGATGAACAAAGGCGTGGAGAGCAGCACCAGCAGCGTGGTGAT CAGCACCATGCCTGCCACTTCGTTCACCGGTCCGTCGTAACGCTTGGCCAACAGGTAGGTGAGCACCGCGGTCGGCATCCCGCACTGGATGGCGAAGGTG CCCGCCGCCACCGCCTCCATGCCCAGGCCGGCAGCGATCCCATAGCCGACCGCGAAACCGCCCCAGACCCGCACCAGAGACAGCAGCAACGGCCGCCAGG TCTCGTGCAGGCGCAGACCGGCCAGCGACAGGCCGAGCATCACCAGCATCAGCGGCACGGTAATCCCGCCCAGCAGGCGGGTCACATCGCGCAACGGCGG CGGCAGGCTCCAGCCCAGGGCGATCAGGCCCAGCGCCACGGCCAGGGCATAGATCATCGGGTTGCGCAGGATGCTCGCCGGGGTGATATCGCCCGAAGCG
Amino Acid Sequence
>porin
MQNLRRAVFAGLVAGTLSEGAAATAGDGGFVEDSELQFLARTYYFNRDYRDSPNNAGRNRFKPRSERNGYREEATQGLRLQFASGYTPGSLGFGLDAHAM LGLQLDSGGGRTGTGNLPVGADGHPDHRYGKVGGALRLRHGETRLKYGQTTTSAPVFAASSNRTLTGMAYGLLLEDRSFDGLLLEGGRFTAASGPGESKV RGDISTVYGRLGAYPVRLDAVGFLGGQWQATERLQLSLYASRFDDIWQQAYFGASHRQPLGGERALRVDLDAYRSRDSGQSRFGRIDTLASSLALGYEQG PQRITLAYQRVHGEQPFDYMAFGDGRSSASMVLANSVGYSDFNGPGERSWQLRYDLDLGALGLPGLSLHALHARGRAGASASSAAESIYAGLYGRDGQHR ESDLGFAYRVKAGPLAGLALRASQAWHRGNASYLDGDIDETRLVVDYSRSIW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site