Pseudomonas aeruginosa AZPAE14996, NT11_RS23150
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14996 AZPAE14996_contig_28, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCGTCGAGCGCGCCGACCTGGCCGTGTCGAAGCACCAGTTCGACATCGTCAGCACCAGGCTGCTGACCCAGTTCTCCAACAACATCCGCAACAACTTCG GCTTCCTCAACCGCGCCGACGAGAGCGGTATTGGCAAGCGCGACAAGCTGTTCGTCCAGGAAGGCCGCAAGGTGTTCAAGGATGTCTGCCCGATGGTCGC CGAGCTGATCGGCGAGCACCTGGCGGCCAATGAAATCCAGGTCGCCGAGGTCAAGCGCTTCTGGCTGCACCAGGCCAACCTGAACATGAACCTGCTGATC ACCCGCAAGCTGCTCGGCCGCGACGCCGAGGCGCACGAGGCGCCGGTGATCCTCGACAGCTACGCGAATACCAGTTCCGCCGGCTCGGTGATCGCCCTGC ACAAGCACCAGGATGACCTGCCCAGCGGCGCCATCGGGGTGCTCAGCTCGTTCGGCGCCGGTTACTCGATCGGTAGCGTGATCCTGCGTAAACACTGATC
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| DNA Sequence for Gene |
>NT11_RS23150
GTGGCGGCGCCTACCGACGCCGAGCTGCTGCCGCGCCTGCTGGCCGGCGAGCAGCGAGCCTTCCGCGAGCTGGTTGGCGCCTACCAGGGCGCCATGCGGG CCGTGGCCTGGGCGATCATCGGCAGATCGCATACCGAGGAAGTGGTGCAGGACGCCTGGCTTGCGGCGGTTCGCGGGCTGGACGGGTTCCAGGGGCGTTC GAGCCTGAAGACCTGGCTGCTGACCATCACCGCCAATACCGCCAAGAGCCGCTTGCGCCAGGTTCGCCGGGAAGTTTTCCTCGACGACCTGCCGGGGCCC CATGGTACGGTGGATGACCAGCGCTTTGCCGCCGACGGTCACTGGAGCCAGCCGCCGCACGCCTGGCACGAGGATTCGCCGGAAGCCCTGCTCGCCGAGG GCGAACTGCGCGATTGCCTGGACAAGACCCTCAACGGTCTGTCCGAACTGCAGCGCAGCGTGCTGACCCTGCGCGAACGCCAGGGCTTGGAGCTGGAGGA AATCCGTGATCTCCTGGATATCACGCTTTCCAATGTCCGGGTGCTGCTGCATCGCGCCCGCCTGAAGGTCTTCGCCACCCTGGAGCATTTCGAGGAGACC GGCCAATGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTGCAAGGAACTGGTCGCCCGGTCCAGCGACTTTCTCGATGGGCAACTGGACTTCCGCGGACAACTGGCGGTGCGCAGCCACCTGCTCATGTGCCGGCA TTGCCGGCGCTTCATCCGCCAGATGCGCCTGACCCAGGCGACCGTGCGCCATCTGCCGGAAGGGCAGGGGCCGGAACTCGACCGCCTGGCCGCGCATCTC TCCGAGTTGCGCAAGGACGCCGCGCGGCGCTGAGCCGGGGTACCCTCGACACCAAGCCGCCGCCCGCGATTCGTGGGCGGCGGCTTTTTCGTTTCCGCTA TCCGGCGTGGGCGAACCGAACCCGGCCTGGCGTGGGCGGCTCTCCCTTCCGCGTGACGAGGTCGAGGAGTGTGGCTGGGCTTGGCGGATATCGCTGCGCG ATATGCGCCCTACGGAGGGGCGGCAATCCGTTTCGCTGGGCGAGCATCCGAAGTTGAGGAGAACGCCTGGGACCTGGCGAATATCGCCGACCGATATTTC
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| Amino Acid Sequence |
>RNA polymerase subunit sigma-24
MAAPTDAELLPRLLAGEQRAFRELVGAYQGAMRAVAWAIIGRSHTEEVVQDAWLAAVRGLDGFQGRSSLKTWLLTITANTAKSRLRQVRREVFLDDLPGP HGTVDDQRFAADGHWSQPPHAWHEDSPEALLAEGELRDCLDKTLNGLSELQRSVLTLRERQGLELEEIRDLLDITLSNVRVLLHRARLKVFATLEHFEET GQC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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