Pseudomonas protegens CHA0, PFLCHA0_c50940 (mqo2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0008924 | malate dehydrogenase (quinone) activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00212
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006099 | tricarboxylic acid cycle |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00212
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pprc01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pprc01200 | Carbon metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pprc01120 | Microbial metabolism in diverse environments | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pprc01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pprc00620 | Pyruvate metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pprc00020 | Citrate cycle (TCA cycle) | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pprc01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF06039 | Malate:quinone oxidoreductase (Mqo) | IPR006231 | Malate:quinone-oxidoreductase | 6 | 492 | 0.0 |
| Hamap | MF_00212 | Probable malate:quinone oxidoreductase [mqo]. | IPR006231 | Malate:quinone-oxidoreductase | 3 | 492 | 51.518044 |
| Coils | Coil | Coil | - | - | 366 | 386 | - |
| SUPERFAMILY | SSF51905 | FAD/NAD(P)-binding domain | IPR036188 | FAD/NAD(P)-binding domain superfamily | 5 | 325 | 1.86E-20 |
| PANTHER | PTHR43104 | L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL | - | - | 3 | 446 | 9.8E-27 |
| Gene3D | G3DSA:3.50.50.60 | - | IPR036188 | FAD/NAD(P)-binding domain superfamily | 5 | 260 | 9.8E-6 |
| NCBIfam | TIGR01320 | JCVI: malate dehydrogenase (quinone) | IPR006231 | Malate:quinone-oxidoreductase | 7 | 485 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.