Pseudomonas protegens CHA0, PFLCHA0_c48230 (fabG11)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens CHA0, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGGAAAGTAACGGTAGTAACGCTCGGCTGCGGCTTCGATGGCAGCCTCATCCTCGAGCTTCTCAGCCTCGGCCAGGTAGGTCAGGCGACCGACTGCCTGC ACGTCATCGGCATCGCGCTCACCCACCAGCAGCGAGCACTTGGGATCCTTCTGCAGGTTGTGGGTGTGCTGGGCGATACGGCTGATCAGGATCAGCGGCC GGCCCTCGGCGTCCAGGCAATAGGGCACCACGGACCCGAAGGGAAATCCCGGCATGGCCTTGGAGTGAGTGGACAGTACCCCGCGATATTCCTTGAGCAG CAGTTCTCGTGCATTCTTGGCAGCTTCAACGCTCACTTTATGACTCCTTATGTAGAATCCGTCGAAAACGGACGGGCGCCTGGAGCAATGTTCCAGCTAC GCCAACAGGGCAATTCTCATCTGCAGCCAGGCCAGGTCCGGCCGCCGAGCGAGGCTTCCCGAAAAGGACTCCCCTCAAGACCAGCTAGCGGGACATGCGA
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| DNA Sequence for Gene |
>PFLCHA0_c48230
|fabG11
ATGCAACTCACTGACAAAGTAATCATTATCACCGGCGGTTGCCAAGGTCTGGGCCGCTCCATGGCTGAGTATTTCGCAGCCAGGGGCGCGCGCCTGGCGT TGGTCGATCTGAACCAGGAAAAGCTCGACCAGGCTGTCGCGGCGTGCAAGACCCACGGCGTCGAAGCCCGTGCCTATCTGTGCAGCGTCGCCGATGAAGA GCAGGTGAACCACATGGTGGCCCAGGTCGCCGAGGACTTTGGCGCCATCCACGGCCTGATCAACAACGCCGGGATCCTGCGCGACGGCCTGCTGGTCAAG GTCAAGGACGGCCAGATGACCAAGATGAGCCTGGCCCAGTGGCAGGCGGTGATCGACGTCAACCTGACCGGGGTCTTCCTCTGTACCCGGGAAGTGGCGG CGAAGATGATCGAGCTCGGAAACAACGGCGCGATCATCAACATTTCTTCGATCTCCCGCGCCGGCAATATCGGCCAGACCAACTATTCCGCGGCCAAGGC CGGGGTCGCGGCAGCCACGGTCACCTGGGCCAAGGAGCTCGCGCGTTACGGCATCCGCGTAGCGGGCATTGCCCCGGGCTTTATCGAAACCGAGATGACC CTGGGCATGAAGCCCGAGGCCCTGGAAAAGATGACTGCCGGCATTCCCCTCAAGCGCATGGGCAAGCCGGAAGAGATCGCCCACTCGGCGGCCTATATCT TCGAGAACGACTACTACACCGGGCGCATCCTGGAAATGGACGGCGGCCTGCGGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCTGCCGTCGCAACGGTAGGAGCCGGCTTGCCGGCGAAAGCGATCTTGAGGACGCCTTCGCCGGCAAGCCGGCTCCTACATGACTCACCCGCCTGAGGC TTCAGTCGTCGCTGATGGTGATATTGGGCATCGCCGGAGCGGCCGCTTCTTGCAAGACAATGCGCGCGCCCACATGCCGCGCCAACTCCTGGTAGACCAT GGCGATCTGGCTTTCCGGCTCGGCGATCACCGTCGGCTTGCCGCCGTCGGCCTGCTCGCGGATCAGCATCGACAACGGTAGCGAGGCCAACAGCTCGACG TCGTACTGGCTGGCCAGCTTCTCGCCGCCGCCTTCGCCAAACAGGTGCTCGGCATGGCCACAGTTGGAGCAGATGTGCACCGCCATGTTCTCCACCACGC CCAGCACCGGGATATTGACCTTGCGGAACATCTCCACGCCCTTGCGCGCATCCAGCAGAGCCAGGTCCTGGGGCGTGGTGACGATCACCGCACCGGCCAC
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| Amino Acid Sequence |
>3-oxoacyl-[acyl-carrier-protein] reductase FabG
MQLTDKVIIITGGCQGLGRSMAEYFAARGARLALVDLNQEKLDQAVAACKTHGVEARAYLCSVADEEQVNHMVAQVAEDFGAIHGLINNAGILRDGLLVK VKDGQMTKMSLAQWQAVIDVNLTGVFLCTREVAAKMIELGNNGAIINISSISRAGNIGQTNYSAAKAGVAAATVTWAKELARYGIRVAGIAPGFIETEMT LGMKPEALEKMTAGIPLKRMGKPEEIAHSAAYIFENDYYTGRILEMDGGLRV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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