Pseudomonas protegens CHA0, PFLCHA0_c46160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
TGTTCGATGCGGGTCGAGCGCGAGCCTTCGTGCAGGGCCTCGAAGAATTCGTCGGGCAATTGCAGGTGGGACTTCATCCAGCGCTCGCACGCGGCGTGAG CCAGGTTCAGGTGCAGCCAGAGGAACTCCTCGCTGTCCTCGGGGTGTTGCAGGGCTTGCAGGGCCTTGGCCGAGTCCAGTTCGCGGCCCCGTTCGCCGGG GCGAAAGCTGAAACCGTAGAGCAGGCCGAACAGATCGGAATCACGGTGACTCTGGTCGATGCTGTGGTTCATGGAGTCTCGCAGGAGGGACAGTGCCTGG CGCGGGTTTCTCAGGTTCACTTGAGCCCCATCATGGCAAGGCTTTTTGACATTTTTGTGACGTTTTGAAGTGCATGATGGAGCCCGTCATACCGATGGTC GGCGGCACTCAAGATTGTCTTGCGCAGGCCGATCACACTCCTACGCTGCACTCATTCGACCCCTCTCGAATGCGCCTTACAGGGATGTTCGGCACTACGC
DNA Sequence for Gene
>PFLCHA0_c46160
ATGCCTTCATCGGGCCTGCTCTATCCCTGCCATGAGATCTCCTCGATGTTTTTGCAAAAATCCCTGAGAGCGCAAATCCTTGCCCTGCTGAGCGGTAGCC TGCTGGCGATGTTGTTGATCGCCCTGGCGAGTTTTCATTTGCTGTCCGGTGGCGTGCAGAGCTACCGCGAGCTGATTGAAGGTCCGCTGCGCAGTTCGCA GTTGATCGACGAGGCCAACCTGCAGTTCAAGAGCCAGGTGCAGGAGTGGAAGAACGTATTGTTGCGGGGCAAGCAGCCCCAGGAGTTGAACAAGTACTGG CAGCAGTTCGAAGACCGCCAGCGCGATGTGCAGAGCATCCTCGGCCAGCTGGTGCAGACCCCCGGGCTGGACGCCTCCCTCAAGAGCCGGGTGCAGCGCC TGGCGGATGAGCACCGGCAGTTGGGTTCGGCCTACCAGAAGGGCCGCGATGCCTATGTGGCCGGCGGTGCCGATCCGAGTGCCGGCGATGCCGCGGTCAA GGGCGTGGACCGGGCCACCAGCGAGCAGATGAGCGAACTGGTGACCGAGCTGCGCCAGCACGGCGACCGGCAGTCCGCCGAGATCAGTGCAGCGGCCGAC CGCACGGTGTGGCTGGGTATTCTGGTGATGCTGGCGTCCGGTTTGCTGATCGGCCTGCTCAGCCTGTGGCTGGTCAATCGCAGCCTGGTGCAGCCGATCC GTCAGTTGATCGACTATGTCGCCCAGCTCAGCCGCGGCCAACTGGCCCAGCGGGTGGCCAGCGAGCGTCAGGATGAACTGGGCAAGCTGGCGATGGCCGC CAACACCCTGCGGGATTTCCTGGCCCAGACCTTCGCCAGCTTGCAGCGCAGTGCCTCGGACCTGGACAGTTCCAGCGGCGAGCTCAACTCCATCGCCACC CTGATGTCCCAGGGCACCAACGAGCAGTTCAACCGCACGGACCAGGTGGCCACGGCGATGAACGAGATGTCCGCCACCGCCCAGGAAGTGGCGCGCCACG CCGCCGACGCCGCTCGTGCCGCAGACGATGCCGACCAGTCGGCGCAGCAGGGCGAACAGGTGATGCAGCAGACCATCCACAGCATCACCCAGATGCGTGG CGAGATTGCCAACACCGCCACCGTGATCCGCCGGCTGGAGGCCGACAGCGGGCGCATCGGCAAGGTCCTGGAAGTGATCCAGGGCATTGCCGAACAGACC AACCTGCTGGCCCTCAACGCGGCCATCGAAGCGGCCCGGGCCGGTGAGGCCGGGCGCGGTTTTGCCGTGGTCGCCGATGAAGTGCGCAGCCTGGCGCAGC GCACCGCGGCCTCGATCACCGAGATCAACCAGATCATCCAGAGCGTGCAGACCGGGGCCGTGGATGCGGCCCAGGCCATCGAGAGCGGCCAGTCCCGCAG CGAGCAGAGCGTGCAGCAGGTGACCGAGGCCGGGGCCATGCTCGAGCGCATCACCGAAGCGGTGGAAGCGATTCGCGACATGAACCGGCAGATCGCGACC GCCGCCGAGGAGCAGACGTCGGTGGCCGAGGACATTTCCCGCAACCTCACCGAGATCACGTCCATCGCCAGTACCAATCTGGACAACGTGCAGCGCACCG AGGCGGCGAGCCGCAATCTGCACGGCCTGTCGGGGCAGTTGAGCGAGGTCACGGCGCGCTTGAGCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCGGCCGGGGTGTATCGGCCTGCTTACCAGGCCGATACACGATCACTCTCAAGTGGCCGGGGCGGGTGTCGATGACCGGGTATCTTCACACCCGACAG GACTCACACCATGGTCAGCATCACTTCCATCGCGATCAACCAGACCCAGGTCAGCCCGAGCAAGACCAGCATCGCCGGCAGTTCGGACAGCGACACTTCA GCGACCTCCACCGCCAGTATCACTGCTGCCAGCGACGCGACCAAGGCGCCGGCCACGGGTGCTGGCGCGGCCGGCGGCAGTTCCAGCAGCGATGATTCCA GCAGCGACTCGGTCAAGCAGTTGCGCAAGCAGATTGCTGAACTGCAAAAGCAATTGCAGGAGCAACAGCAGCAGTTGCAGGCCGCGCAGAGCAAGCAGGA AAGTGCCGATGCCAAGGCCGCGCAAGTAGCGGCAGCCCAGGCTCAGGTGGCCAGCACCAGCGCTTCGTTGCAGACCGCCACCGCGGCCTTGTTCCAGGCC
Amino Acid Sequence
>methyl-accepting chemotaxis transducer
MPSSGLLYPCHEISSMFLQKSLRAQILALLSGSLLAMLLIALASFHLLSGGVQSYRELIEGPLRSSQLIDEANLQFKSQVQEWKNVLLRGKQPQELNKYW QQFEDRQRDVQSILGQLVQTPGLDASLKSRVQRLADEHRQLGSAYQKGRDAYVAGGADPSAGDAAVKGVDRATSEQMSELVTELRQHGDRQSAEISAAAD RTVWLGILVMLASGLLIGLLSLWLVNRSLVQPIRQLIDYVAQLSRGQLAQRVASERQDELGKLAMAANTLRDFLAQTFASLQRSASDLDSSSGELNSIAT LMSQGTNEQFNRTDQVATAMNEMSATAQEVARHAADAARAADDADQSAQQGEQVMQQTIHSITQMRGEIANTATVIRRLEADSGRIGKVLEVIQGIAEQT NLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASITEINQIIQSVQTGAVDAAQAIESGQSRSEQSVQQVTEAGAMLERITEAVEAIRDMNRQIAT AAEEQTSVAEDISRNLTEITSIASTNLDNVQRTEAASRNLHGLSGQLSEVTARLSA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site