Pseudomonas protegens CHA0, PFLCHA0_c45500 (flgC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
CAAACCCTTGAAATACGGGGTTTGATGACTTGGCACGCAGCTTGCTATATCCGAGTTACGAAAAATCAGGTCACCCAAAGGTTTCCGCCATGAGCATCAG CTTCGATAAAGCGCTCGGTATCCACGAACAGGCCCTTGGCTTTCGCGCCAAGCGTGCCGAAGTTCTGGCCAACAACATCGCCAACGCCGATACCCCGAAC TACAAGGCTCGGGACCTGGACTTCTCTGCCGTGCTTGCCGAGCAGAATCAGAAGGCCCAGAACGGTACCTTCGCGTTGAACATGACCAACAACCGGCATA TCGAAGCCCAGGGCTTGAGCAGTGGTGATGAATCGCTGCTGTATCGCACCCCGATGCAACCTTCGATCGACCAGAACACCGTGGACGCCCAGCTGGAGCA ATCGAGCTACGCGCAGAACTCGGTGGATTTCCAGGCCAGCTTCACGCTGCTCAACAGCAAATTCAAAGGGCTGGTAGCAGCCCTGCGCGGAGAGTAATCC
DNA Sequence for Gene
>PFLCHA0_c45500 |flgC
ATGTCCCTCGCCAGTGTTTTCAATATTGCCGGTAGTGGCATGAGCGCCCAGACCACCCGTCTGAACACCGTCGCCAGTAACATCGCCAACGCCGAGAGCG TCTCGTCGAGCATCGACCAGACCTACCGCGCTCGTCACCCGGTGTTTGCCACCATGTTCCAGGGTGCGCAAAGCGGCGGCAGCGACTCGCTGTTCCAGAA CCAGGACGCTGCCGGCCAGGGCGTGCAGGTACTGGGTGTGGTCGAAGACCAGAGCAACCTCGAAGCTCGTTACGAGCCGAACCATCCCGCCGCTGATGCC AAGGGTTATGTCTACTACCCCAACGTCAACGTGGTGGAAGAAATGGCCGACATGATTTCTGCCAGCCGTTCGTTCCAGACCAACGCTGAAATGATGAACA CCGCCAAAACCATGATGCAGAAGGTCCTGACCCTGGGTCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGGGGCGAAGACCATGAGCGTTACTGATACCACCAACGCCCCATCCCTCAAGGATATCCTGGCGAATTCGTCGAAAACGACGAGCAATACCAGCGCCG ACGGCCTGGCCGCGGCGACCAACAGCGCCACCGGCAAACAGAGCCTGGGCAAGGACGCATTCCTCAAGCTGCTGGTAACCCAGCTGAACAACCAGAACCC GCTGGATCCGCAGGACAACAGTGCGTTCGTTGCGCAGTTGGCGCAGTTCTCCACCCTGGAAGGCATCACCACCCTCAACTCCTCGGTGAATGCGATCACG GGTAACTACAAGTCTTCCCAGGCCTTGCAGGCTTCGTCCCTGGTGGGGCGCTCGGTCATCGTGCAGACCGGCACTACCCAGGTCGACACCAGCAAGAGCA TGACCGGCTCGGTCACCGTGCCATCCAGCGTGAACTCGGTCACCGTGACCGTCACCGACAAGGACGGCAATACCGTCAAGACCATCGACATGGGCAGCCA
Amino Acid Sequence
>flagellar basal-body rod protein FlgC
MSLASVFNIAGSGMSAQTTRLNTVASNIANAESVSSSIDQTYRARHPVFATMFQGAQSGGSDSLFQNQDAAGQGVQVLGVVEDQSNLEARYEPNHPAADA KGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site