Pseudomonas protegens CHA0, PFLCHA0_c43390 (aroF2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens CHA0, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCGGTTGCACACTATCAGCCTCGGTGGCATGGCGTGCAATTACCACCGTGCCTGGCGCCGCGGTACCGCGCTGGAGGTGTACATGCCAACGTTGGGGG ATAACGCCCGTTACAACGGCTATGTCGCCTGGTGCCTGAAACGCAAGCGTGGCTACCTGGTGGGCATCGCTTTCGTCGACGAACAAACGCTGTTCGGCGC GCGCATGGGTGAGCAGGTGTGCCAGATCGCCCGCTACTGTCGCCTGCATGAACCTCAGAGCGAACAGCAATGCATTGAGGCGCTGGCGCTGGATTGGGTC GAGCAGCACGCAGAAGACTATTCCGAAGACCGTGTGCACCAGGCTTTTGTGCAGCCATAGCCCAATAAAACCGCCACCTGCCCATTGTAGAGTCACCGGC TAACGCGCTAAGGTTCCGCTCCCCGACGCGCTCAAATCCGCTGTGCTCCGCCGCGCGGGGATCGCTGGCGGCCGGCACCCGTGACCTGACGAGTAACACG
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| DNA Sequence for Gene |
>PFLCHA0_c43390
|aroF2
ATGGCTGATTTACCGATCAACGACCTTAACGTCGCCTCCAACGAGACCCTGATCACCCCTGATCAACTCAAACGAGACATCCCGCTGAGCGACACCGCCT TGCGCACCGTGACCAAGGGTCGCGAAGTGATCCGCAATATCCTCGACGGCACTGATCACCGCCTGTTCATCGTCATTGGGCCCTGCTCGATCCACGACAT CAAGGCAGCCCACGAATACGCCGAGCGGCTCAAGGCACTGGCGGCTGAAGTCTCCGACACCCTGTACCTGGTGATGCGCGTTTATTTCGAGAAACCGCGG ACCACCGTCGGCTGGAAAGGCCTGATCAACGACCCTTACCTGGACGACTCGTTCAAGATCCAGGACGGCCTGCACATTGGTCGCCAATTGCTGCTGGACC TGGCTGAAATGGGCCTGCCTACTGCCACTGAAGCCCTAGACCCGATCTCCCCGCAATACTTGCAGGACCTGATCAGCTGGTCGGCCATTGGTGCACGTAC CACCGAATCCCAGACTCACCGCGAAATGGCTTCGGGCCTGTCCTCGGCCGTGGGCTTCAAGAACGGCACCGACGGTGGCCTGACTGTGGCAATCAACGCC TTGCAGTCGGTTTCCAGCCCTCACCGTTTCCTGGGGATCAACCCCCAGGGCGGCGTGTCGATCGTCACCACCAAAGGCAACGCCTACGGCCACGTGGTAC TGCGCGGCGGCAACGGCAAGCCCAACTATGACTCGGTCAGCGTCGCCGTCTGCGAGCAGGCCCTGAGCAAGGCCAAGATCAAGCCGAACATCATGATCGA CTGTAGCCACGCCAACTCCAACAAGGACCCGGCACTGCAGCCGCTGGTCATGGAAAACGTGGCTAACCAGATCCTCGAGGGCAACCAGTCGATCATCGGC CTGATGGTGGAAAGTCACTTGAACTGGGGTTGCCAGGCGATTCCGAAGAACCTGTCGGAACTGCAGTACGGCGTATCGATCACCGATGCCTGCATCGACT GGGAAAGTACCGAGAAGACCCTGCGCGGCATGCACGCCAAGCTCAAGGACGTCTTGCCGAAACGCGATCGCAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCTTTCCTGCAGACACAAAAACGCCGGGCCAAGCCCGGCGTTTTTCATGGTCGCCCCGGTCAGAGCTTTGCTGCGTGACGCTGATGACGCTCCATATAG CGCTCTACGTACGAGCAGGACGGAATCACTGTGTAGCCCATGCGTTCGGCGTACTCCAGCGCCTGCTCGGTCAGCGCCGCGGCAATACCGCGCCCACGCA GTGCGTTGGGCACGAAAGTGCGATAGATATCCAGGGTCTGCTTACCCAGGTCCATATAGGTCAGGTAGGCACGATGACCGTCCACATTGGTCTCGAACTG ATGACCAGCCTGGTCATGGTGGATGGACAACGCCTCGCTCATCACTACTCCTTGCGGGTCTGGAATGCTGACCCCTACCTTACCGATGTTTTTCCGGCGA AGGAACAACTTACGCCACCTCGTGCCTGTCGGCCGCCCGTAGAAGCTCTCGCTCTTGCGCCATCAGCACGTTACAAAATATAGGCGCCATTGGCACAAAT
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| Amino Acid Sequence |
>phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive
MADLPINDLNVASNETLITPDQLKRDIPLSDTALRTVTKGREVIRNILDGTDHRLFIVIGPCSIHDIKAAHEYAERLKALAAEVSDTLYLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRQLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGGLTVAINA LQSVSSPHRFLGINPQGGVSIVTTKGNAYGHVVLRGGNGKPNYDSVSVAVCEQALSKAKIKPNIMIDCSHANSNKDPALQPLVMENVANQILEGNQSIIG LMVESHLNWGCQAIPKNLSELQYGVSITDACIDWESTEKTLRGMHAKLKDVLPKRDRS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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