Pseudomonas protegens CHA0, PFLCHA0_c38910 (fatA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens CHA0, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCCTGCAAAAGTTCATCGTTCGTCTTCCAGGCGACCTGCACAACCAGCTCAAACACATTGCCAAACGAGAAAACCGCAGCATGAACAATGAAATCGTCGA CCGCCTGGAAAAGTCCCTGGTCGTCGATGAAACCCGTGAGATGAATGAGAAACTCATCAGCCTGCTGCTGCGCAAGGTCGATTCCATGGAGGAGCGGATC AAGTGCCTGCAGATGGGCCACCCGGAGCCCGAGCAGGATTGCCCACCGCCGTGTTACGCAAGGACTTGAAGCGGCGACTCCCGCCACGCGATCTTCTACC TTTCCCGCCTTTACCCCCTCGCTGCAGCTTGTATGATGGCGCCTGCCCGACAGTACCCAGCGGCAACCGCCAGGCCCCGGCCTGATGCTCGCAGGGCTCC CCCGCTGTTCCTCACTACACACGCAGGTCGACGCTCCTAGCCTTCCCAGGAACCTCCTCCGGCTTCTGCCATGGGGCCGCGTCGCCTTCTAGGATTGTTC
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| DNA Sequence for Gene |
>PFLCHA0_c38910
|fatA
ATGAGCCGGATTCACCCGACTGCCCCCGCGCGCACCTGCAGCTCAGCTTTGCCCCTCAACCGCCTGACCCTGGGCCTGCTGCTGGCCGGCAGCAGCGCCG TGGCCAACGCCGCGGGCACCCAGTTGCCGACCCAGACGGTCAGCGGCGAAGAGCCCTACGGCTATCGCGTCGACAGCGCCTCGGTGGGTGGTTTCAGCGA AGCGCCCTTGCTGGATACCCCGGCCTCCATCAGCGTGATCAATGAAGACATGATCCTCGACCAGCAGGCCCGACTGCTCAGCGACGTGCTGAAGAACGAT GCCTCGGTGGGCCAGAGCTACGCGCCGGTGGGCTACTACGAAAACTTCGAAGTGCGCGGCTTCTCGCTGAATGCCGCCAGCAGCTACAAGATCAACAACC GCACCATCACCGGCGAGCAGAACGTCGCCCTGGAAAACAAGCAGCGGGTGGAATTGCTCAAGGGCCTTTCCGGCCTGCAAAGCGGGGTCAGCGAGCCCGG CGGGTTGATCAACTATGTGACCAAGCGGCCCACGGACATTCGTTCGGTGACCGTTTCCACCGACGACCGCGGCAGCGGCTACCTGGCCACCGATGTCGGC GGCTGGTTCGGCAGCGAACAGCAGTTCGGCCTGCGTGCCAACCTGGCCCATGAAGACCTGCACTCCTACGTCGAGCACACCAATGGCCAGCGCGACTTCG CCTCCCTGGCCCTGGACTGGAACATCAGCCCCGACGCCCTGCTGCAACTGGACATCGAATACCAGAACAAGCAGCAGCGCTCGGCACCGGGCTATCAACT GCTGGGGGGCTCCAGCCTGCCCCACCACGCCTCGCCGAAAAAACTCCTGGGGCACCAGAGCGGGTCAAAGCCGGTGACCAATGAATCGCTGAACATCGGC GGCAACTTCGAGTACCGCTTCAACGATGACTGGAAGGGCAACCTCAGTGCGTCGCGCAGCAAGGTGGTGATCGATGACTACAGTTCGTTTGCCTGGGGCG GCTGTACCACCGGCTGCATCAATGCCAACGGCAACTACTTCAGCCCCGAAGGCAACTACGACATCTACGACTTCCGCAGCCCCGACGACACCCGGCGCAA CGATGAAGTGCAGGCTGTGCTCAATGGCCGCTTCGACGCCGCAGGCCTGGGCCATGAGTTGAGCGTGGGGACCAGTGCGTTTCGTCGTGTGGTGAACAAG CGTGAAGCGATCAATGAGTCATTCGGTAGTGGAAACATCAACAACGAACCGGAAGATCATCCTCGCTCCACTGAAGACCTGCGTGACTCCCACAAACGCC TGGACAGCCGCCAATACGGCCTGTTCCTCAGCGACCGCATCAGCTTCAACGAACAGTGGCAGACCGTCCTCGGCGGGCGCGAAGTACGCCTGGACGAAGA GAGCTTCGACAAGGACGGCGTGCGCGATCGCCACACCCAACGCTATGTATTCCTGCCCCAGGCCGCGCTGATCTACAAACCGATCAACAACATTTCGCTG TACACCCAGTACAGCAAGGGCCTGTCCCTCGGTGGCCAGGCCCCCTGGTTCGCCAGCAACAATGGCGAGACCCTCGCCCCCACCGTCTCGCGCCAAATCG AAACCGGGATCAAATATGACTGGCAGCGCATGAGTTTTACCGCCGCCCTGTTCCAGATGCGCCAGGCCTACCAGTACTCGCGCCCCGACGCTGCCGGCGG TTTCACCTACGTCCAGCAGGGCCAGCAAAAGAACACTGGCCTGGAGCTCTCCGCCAACGGCTGGGCCACCCAGCGCCTGCAGATTGCCGCCAGCGTCGCG GCAATTCGCTCCCGGGTGGAGGGCACCGGTACCCCGGCCTACGAGGGGCACCAGACCCTCAACGTCCCGCGCCTGCGAGCCAGCCTGCAGGGCGACTACG CCCTGCCCTGGCTCGACGGCCTGGCCCTGCTGGGCGGCATGCAATACAGCGGCAGCCAATACGCCGACCGCCAGGGCAACGTCGCCACCGGCGCCTACGC CATCTTCAACATCGGCAGCCGCTACAGCACCCGTATCGATGGCTACGACACCGTGTTCCGCCTGACCGTGGACAACCTGTTCGACAAGCGCTACTGGCGC GACACCGGGGAATACATGGGCGACGACTACCTGTTCCAGGGCGCGCCGCTGACGGCTCGGTTGAGTGCTTCGGTGAATTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCAGCGCCAACCGCCCAGCGAGAATACGCCTCTCAAGTTAGCCGCTGTATTGTAGGAGCCGGCTTGCCGGCGAAGGCGGTCTCAAGGACACCTTCGCTG GCAAACCAGTGACTATGCGAATCTGTCAGGCATGCACAAAAAAGCCGGTCATCAAGACCGACTTGTCAGCGCCTGGTCTACTCGCCATCAAACCGGCTGC AAAGCCCGCAAGGCTTCAGGGTACTGGCTGGCCACACGCAGCAGCGTTTGAGCCGCGCCTGTCGGCTGGCGCCGGCCTTGCTCCCAATCCTGCAGTGTAC GCAGGCTGACCCCCAACAGCGTGGCAAACGCACTCTGAGAGAGCCCCACCTTAGCCCGGGCCTCTGCCGCCCCGGACAGTTTTACCACCGTTGCACGCGC CGCCTTGCCGGCTTTCATCTGGCCCACCGAAGTCAGCAAATCCTTCTGAAACTGCTGCAGTTCATGGTCCATGACTGATTCCCTCTTTCAATTGATTCAG
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| Amino Acid Sequence |
>ferric anguibactin receptor
MSRIHPTAPARTCSSALPLNRLTLGLLLAGSSAVANAAGTQLPTQTVSGEEPYGYRVDSASVGGFSEAPLLDTPASISVINEDMILDQQARLLSDVLKND ASVGQSYAPVGYYENFEVRGFSLNAASSYKINNRTITGEQNVALENKQRVELLKGLSGLQSGVSEPGGLINYVTKRPTDIRSVTVSTDDRGSGYLATDVG GWFGSEQQFGLRANLAHEDLHSYVEHTNGQRDFASLALDWNISPDALLQLDIEYQNKQQRSAPGYQLLGGSSLPHHASPKKLLGHQSGSKPVTNESLNIG GNFEYRFNDDWKGNLSASRSKVVIDDYSSFAWGGCTTGCINANGNYFSPEGNYDIYDFRSPDDTRRNDEVQAVLNGRFDAAGLGHELSVGTSAFRRVVNK REAINESFGSGNINNEPEDHPRSTEDLRDSHKRLDSRQYGLFLSDRISFNEQWQTVLGGREVRLDEESFDKDGVRDRHTQRYVFLPQAALIYKPINNISL YTQYSKGLSLGGQAPWFASNNGETLAPTVSRQIETGIKYDWQRMSFTAALFQMRQAYQYSRPDAAGGFTYVQQGQQKNTGLELSANGWATQRLQIAASVA AIRSRVEGTGTPAYEGHQTLNVPRLRASLQGDYALPWLDGLALLGGMQYSGSQYADRQGNVATGAYAIFNIGSRYSTRIDGYDTVFRLTVDNLFDKRYWR DTGEYMGDDYLFQGAPLTARLSASVNF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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