Pseudomonas protegens CHA0, PFLCHA0_c34990

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
CTGGGCGCGTGCATTTTCTCCGAGCGCATCTGGCAGGTCATCGGCGAGCCGGGCAAGGGTCGCTGCTTCACCCACGGTTTCACCTATAGCGGGCACCCGG TGAGTTGCGTCGCGGCGTTGAAGAACATCGAGATCATCGAGCGGGAAAACCTGCTGGCCCATGTCGAAGAGGTCGGCGTCTATATGGAGCAGCGCCTGCA GACCCTGGCCGAACTGCCCCTGGTGGGCAGCGTGCGCTGCAAGCGGCTGATGGCCTGCGTCGAATTCGTCGCCGACAAGCGCACCAAGGCGCTGCTGCCC GACGGGCTGAACATCGCCGAGCGCATCCATCTGCGGGCCCAGGCCAAAGGCTTGTTGGTGCGCCCCATCGGCCATCTCAATGTGATGTCGCCCCCCTTGA TCATCACTCGCCAGCAGATCGACGAAATAGTCGCCACCTTGCGCGACTGCATCCTCGAAGCCGCCGCCGAACTGCGCCAGAACGGCCAGTACCTGGGCCA
DNA Sequence for Gene
>PFLCHA0_c34990
ATGACCCCTAGCCGCTGGCAGCGCGAATATCGGCCCGGGGTCTTACCGGGCCTGCGCCCGACCGTTAGACTGCCGGGCATGAGCGCACCAGCAAACACTT CTACCGCCCCCCTCAGCCTCCCTGCCCTGCAGGCCTGGCACGCCTGCCTGGCCCAGGCCTTCGGCAGCGTGGACGATGGCACTTTCCTGCAGCACCTGGC GACGGCGCTGAACGCCCTGACGCCCATCGAATCGATGATGATCAGCCTGGAACGCAAGGGCCTGCCACCGCAATTGCTGCATGAACGGGGCATAGTCGGC GCCTACCGCGACGAGATCATCAACCGCTACTTTTCCCGCGGTTATCTGCTGGATCCGTTCTGCCTGGCGGTGGAAAACGGCCTGGCCGAAGGTTTCTATC ACCTGTCGGAAATCGCCCCGGACGACTTCTTCAGCAGCGAGTACTACAAGACCTACTACCTCAAGACCGGGGGCGCGGAAGACAGTTACTACATCGTCGA CCTCGATCCCCAGAGCAAGATTTCCCTGTGCATGTTCCAGGGCCTGAGCGGTGAGCGCTTCGCCAGCGAACCCCTGGCGCTGCTGCGGGCGGTGGAACCG CTGGTGCGCGAGCTGATCCGCCGTTTCGGCGGTAGCGGCCTGCAACCGCTGTTGCACCAGGCCAGTCAGGACGCGCTGCCCGCCCCGGCACCGGCCAACT TCAACCAGCAGATCGAAGCGGCGTTCATGAGCTTTGGCCAGCCACTGCTGACGGTTCGCGAGCGCGAAATTGCCCACCTGATCCTGCGGGGGCACTCGGT AAAATCCACGGCCAAGGTGCTGGAGATTTCCCCGGAAACCGTGCGCATGCACCGCAAGAACCTCTACACCAAGCTGACCATCAACTCCCAGGCCGAGCTG TTCGCGCTATTCATCGACTGGCTGACCCAGCCCGCACCCACCAGCCAAAGCCCCCTGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGCGAGCGTGCTCGCGCTGCACTCAAAAACGCCGCGGTCACTGAGTGAACGCGGCGTTTTCGTTGACGATCTTCGCGAGCAAGCTCGCTCCTACGGCCT TTCCATCAGCGGGCGGCCCAGGCGTTGAAACGCTGCTCCAGCTCCTCGCCATGATCGACCCAGAACCCCGCGTCCACTGCCCTGGCGCCCTTCAAATTGG CCTCGAAGGTCGGCAGTTGCCGCTGCACCGCCTCAGGTAGCAATGGCAGCGCCTGACGATGCACCGGCCCGTAGGGGATGTTTTCAGAGAACACTTTCTG CGCCTGGGGCTGGCTGGCGAACAGAATGAAGGCTTCGGCCAGGGCCTTGTTCGGCGAGCCCTTGACCACCGCCCAGTACTCCGGGTCGTACAGGCTCTGG GGCCAGAGGATACTCAGCTGCATGCCCTCCTTCTGGGCCATGGCAATGCGCCCGTTGTAGGCTGCGCTCATCACCACGTCACCGGCCACCAGCCACTGCG
Amino Acid Sequence
>transcriptional regulator, LuxR family
MTPSRWQREYRPGVLPGLRPTVRLPGMSAPANTSTAPLSLPALQAWHACLAQAFGSVDDGTFLQHLATALNALTPIESMMISLERKGLPPQLLHERGIVG AYRDEIINRYFSRGYLLDPFCLAVENGLAEGFYHLSEIAPDDFFSSEYYKTYYLKTGGAEDSYYIVDLDPQSKISLCMFQGLSGERFASEPLALLRAVEP LVRELIRRFGGSGLQPLLHQASQDALPAPAPANFNQQIEAAFMSFGQPLLTVREREIAHLILRGHSVKSTAKVLEISPETVRMHRKNLYTKLTINSQAEL FALFIDWLTQPAPTSQSPL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site