Pseudomonas protegens CHA0, PFLCHA0_c34630
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pprc00130 | Ubiquinone and other terpenoid-quinone biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pprc01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR10204 | NAD P H OXIDOREDUCTASE-RELATED | - | - | 1 | 184 | 1.1E-35 |
| Gene3D | G3DSA:3.40.50.360 | - | IPR029039 | Flavoprotein-like superfamily | 1 | 198 | 4.0E-46 |
| Pfam | PF02525 | Flavodoxin-like fold | IPR003680 | Flavodoxin-like fold | 1 | 187 | 2.3E-45 |
| FunFam | G3DSA:3.40.50.360:FF:000063 | Probable NAD(P)H dehydrogenase | - | - | 1 | 194 | 5.3E-94 |
| SUPERFAMILY | SSF52218 | Flavoproteins | IPR029039 | Flavoprotein-like superfamily | 1 | 194 | 6.93E-48 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.