Pseudomonas protegens CHA0, PFLCHA0_c30950

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
CGCAGCCGGTCACCCATGTGCTGGTTCGCCGGTTACGCCGGGGTGCCGACCAAGGCCTTTGTCGGCAACTACTACTTAAGCGGCGATACCGTGGAGTTGA ACCAGGACGGCAGCATCAGCTTCGTGGGCCGCAGCGACGATGTGATCACCACCTCCGGCTACCGGGTCGGCCCGTTCGACGTGGAAAGCGCACTGATCGA ACACCCGGCCGTGGTGGAAGCGGCGGTGGTGGGCAAGCCCGATCCGGAGCGCACCGAACTGGTCAAGGCCTTCGTGGTGCTCAGCGAGCAGTACCGCGCC ACCGATGAGCTGGCAGAGGAGTTGCGCCAGCACGTGCGCAAGCGCCTGGCGGCTCATTCCTACCCCCGTGAAATCGAATTTGTCAGCGAATTGCCGAAGA CCCCAAGCGGCAAATTGCAGCGCTTTATCTTGCGCAACCAGGAAATCGCCAAGGCTCAAGAGGCCGCGGCGTCAACAGCTACCGCATGAACAGGATTTGA
DNA Sequence for Gene
>PFLCHA0_c30950
ATGATGGACATTGCAAACCAGGTGTTTCTCGTCAGTGGCGGCGCTTCCGGCCTGGGAGCCGCCAGCGCCGAAATGCTGGTCGCCGCCGGCGCCAGGGTGA TGCTGGTGGACCTCAATGCCGAGGCCGTGGCGGCCAAGGCCCAGCAGCTGGGCTGCCAGAGCGTGGTGGCCGACATCAGCCAGGAAGCCGCGGCCGAAGC GGCGGTGCAGGCCACGGTCAAGGCCTTTGGCGGGCTCAACGGCCTGGTCAACTGCGCCGGCATCGTGCGTGGCGAGAAAATCCTCGGCAAGAACGGCCCC CACACCCTGGCCAGCTTCAGCCAGGTGATCAACGTCAACCTGATCGGCAGCTTCAACCTGCTGCGCCTGGCAGCAGCAGCCATTGCCGAAAGCCCGGCCA ATGCCGACGGCGAGCGCGGGGTGATCATCAACACGGCGTCCATCGCCGCCTTCGACGGGCAGATCGGCCAGGCGGCCTACGCTGCCTCCAAGGGCGCCAT CGCCAGCCTGACCCTGCCGGTGGCCCGGGAGCTGGCACGCTTCGGCATCCGGGTGATGACCATCGCCCCGGGTATTTTCGAAACCCCGATGATGGCCGGC ATGAGCGACGAAGTGCGGGCCGGCCTGGCCGCCGGCGTGCCATTCCCGCCACGCCTGGGCAAGCCCGCCGAGTACGCCGCGCTGGTGCGGCACATCATTG AAAACAGCATGCTCAACGGCGAGGTGATCCGTCTCGACGGCGCCTTGCGCATGGCCGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGGATTCATCATGTCCATTGCCCAAGATCCGATTGTCATCGTCAGCGCCGTCCGTACCCCCATGGGCGGTTTCCAGGGGGACCTCAAAGGCCTCAGCG CGCCGCAACTGGGGAGCGAAGCCATTCGCGCCGCAGTCCAGCGCGCCGGCATTGCACCGCAGGCGGTCGAAGAAGTGCTGTTCGGCTGCGTGCTGTCCGC CGGCCTCGGCCAGGCCCCGGCCCGTCAGGCCGCCCTGGGCGCCGGCCTGGACAAGGGCACCCGCTGCACCACCCTGAACAAGATGTGCGGTTCCGGCATG GAGGCCACCATCCTGGCCCACGACATGCTGCTGGCCGGCAGTGCCGAGGTGGTGATCGCCGGTGGCATGGAAAGCATGTCCAACGCCCCGTACCTGCTGG ACCGCGCTCGCAGCGGCTACCGCATGGGCCACGGCAAGGTGCTGGACCACATGTTCCTCGACGGCCTGGAAGACGCCTACGACAAGGGCCGCCTGATGGG
Amino Acid Sequence
>3-hydroxyacyl-CoA dehydrogenase FadB2x
MMDIANQVFLVSGGASGLGAASAEMLVAAGARVMLVDLNAEAVAAKAQQLGCQSVVADISQEAAAEAAVQATVKAFGGLNGLVNCAGIVRGEKILGKNGP HTLASFSQVINVNLIGSFNLLRLAAAAIAESPANADGERGVIINTASIAAFDGQIGQAAYAASKGAIASLTLPVARELARFGIRVMTIAPGIFETPMMAG MSDEVRAGLAAGVPFPPRLGKPAEYAALVRHIIENSMLNGEVIRLDGALRMAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site