Pseudomonas protegens CHA0, PFLCHA0_c29750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
GTGGCGGGCTACCGGCAGATGTGGCTGTGGCACGCCCTCGAGGAAACCGAGCACAAGGCCGTGTCCTACGACGTCTGGAACAGCGTGATCAAGCCCGGGC CCAAGCGTTACCTGATCCGCACCGGGAGCATGCTGTTCACCACCCTGGGCTTCTGGCTGGTGGTGTTCGACTTCCATGTGCGCATGCTGATCGCCGACCG CCGTCGCGGCGGCCACTGGCGCGGGTTGTGGCAGGTGGTCAAGTACCTCTACGGCCCCAAGGGGGTGTTCCCGCGGATCGCCCTGCCCTGGCTGCAGTTC TTCAAGCCGGGCTTTCACCCCTGGGACCACGACAACCGCGAGCAACTGCAACGCATCGACGGCCTGGTGCAGGACATCGAACGCACCCGCGCCGCCGCGG CCAAGTGACAAATGCCGGCACGGCGCAACAGCGGCGTGCCGGCATCCCCTGGCGGGGCTGCTAACCTGCAACGCACCCTTAGGTGCTGCGAGCCCGCGCG
DNA Sequence for Gene
>PFLCHA0_c29750
ATGACCCTGATTCTGTTGCCCCACGCCGACTACGACCCCAGCGAAAGCAGCCTGCCCTGGCAGGCTGCCCGGGACGCCGGTTTTGCCGCGCAGTTCGCCA CCCCCCTGGGGATGCCGGCCTACGCCGATTCGCGCCTGGTGAGCCTGGGGTTCGGCCCGCTCAACCCGTTGTTGATGACCCCGGCGGCCGACCTGGCGCG CTATCACGCCATGACCCGCGACCCGGCCTTTTGCAGCCCTCTGCCCTATGCCGGGGTCGACCCGGCGGCCTACGAGGGCTTGCTGATTCCCGGCGGTCAC GCCCGGGGCATGCGCAGCCTGTTGGAATCCGAGGAGGTGCGGCGGATCATCCTGGCCTTCTTCCAGGCCGACAAACCCGTGGCCGCGGTGTGCCACGGCC CCCTGGCCCTGGCACGCTGCATCGATCCGGCCAGCGGGCGCTCGGTGCTCCATGGGCGCAAGGTCACCGCCCTGCTGGCCGGCCCCATGGAACTGGCGGC CTGGCTGGTCACCGCGCCGTGGCTGGGGCGCTACTACCGCACCTACGACCACAGCGTCGAGCAAGAGATCAAGGCGGCCCTGGCCAGCCCGGCGGATTTT CTGCCCGGGCCCTGGCTGCCCCGGCGGGATTCGGCAGAGCACCCCGAGCGCGGTTTTGTGGTCCGCGACCGCAATCTATTGACCGCGCGCTGGCCCGGGG ACTGCCACCGCTTCGCCAATGAATGGGCGAGCCTGCTGCAACAGGCTCGCGACGCCCAACCTCAGGCGCAGCAGGCAGAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGGCTTGAAGGCATGGCTGCGCGCGCCCCAGACCAGCATCAGGCCCACCAGCGCCAGGGCGGCCATGGCCCAGGGAAAAGACGCCGCGCCATAGCGTT GCAAGAGCAGGCCGCCGACCATACCCCCGCAGGCAATGCCCAGGTTGAAGATGGTCACCAGCATCGATTGCGCGACATCCGCCCCCTCCCCGGCCACATC CGCCACGGCGGTCTGGAGCAAGGTCGGGGCGCCACCGAAGGTCAGGCCCCAGGCGCCAATGCCGAGCCAGGCCAGCCAGGGCTGGCTGGCAGCGATCCCC AGCAGCAGGCACGCCAGGGCGAAACCGGCGAGGCTGCACAGGGTCAGCCCGCGCAGCCAGCGGTCGACCCCGAGCCCGGTGAACCAGATCCCCACCAGGG AGGCCAGGCCGAACACCAGCAGCGCCCGGTCGAGAGAGGCCGCCAGGCCCAGGGACGCGAGGAACGGCGCGATATAGGTGTAGAGGATGTTGTGGGCCAG
Amino Acid Sequence
>putative ThiJ/PfpI family protein
MTLILLPHADYDPSESSLPWQAARDAGFAAQFATPLGMPAYADSRLVSLGFGPLNPLLMTPAADLARYHAMTRDPAFCSPLPYAGVDPAAYEGLLIPGGH ARGMRSLLESEEVRRIILAFFQADKPVAAVCHGPLALARCIDPASGRSVLHGRKVTALLAGPMELAAWLVTAPWLGRYYRTYDHSVEQEIKAALASPADF LPGPWLPRRDSAEHPERGFVVRDRNLLTARWPGDCHRFANEWASLLQQARDAQPQAQQAER
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site