Pseudomonas protegens CHA0, PFLCHA0_c26620

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
TTTTCAGCGACCTGTTGCAAGCCATGAAGGTGGAAACCCACGAGCGCATCGAACAGAACCGGATCGCCATTGAAAGCCTGGACACCCCGGCTGACCCGGC CGACGCCGCTTCCGTCGAAGAAGAGCGCACCTGGTTGGTCAACGCCATTGATCGCGACCAGCGCATGCTGCCGCAACTGGAACAGGCCCTGGGCCGGATC AGCGACGACAGCTTCGGCTGGTGCGACGACAGCGGCGAGCCGATCGGCCTCAAGCGCCTGCTGATCAGCCCCACCACCAAGTACTGCATCGAGGCCCAAG AGCGCCACGAGCAGATCGACAAGCATCAGCGTCAAGCCTGATCGCCAGCCCCCGCCACAGCGGGGGCTCTGTTTTTTCGGGCAGTGCCCGCCCGCACATT CTCTTGATCTGCTGCAAACCCGCGACTAAGGGACCATGGATAATGGCCCTCTAGTGGCGTCTAATGCCGCAAACAATTAGAACGATGTGGGGTGACACAG
DNA Sequence for Gene
>PFLCHA0_c26620
ATGTCAAGAGATGGATCTCTAGCGGCGCCGGTCGCACAGCCGCTGGCAACACCCGAAACCGCCGCCCGCTGGTGGGCGCCGTCCTTGCAGAGCGCGGCGC TGATGGCGCTGTTCGCCGGCCAGGCCCTGGGCGGCTGGTCGCTGTACCTGTGCCTGCCCGTGGCGGTGCTGGTGATCTGGCTGCCGCGGTTGCGCGGGCG CGGGCGGCCCCTGGTGGCGAACGCGACGGCTGACGATCAGTTGTCGGCGCTGACCCGCGACCTGTCCTACGGCACCACCCATAACGCACTGTCCGCGGCG GGCGTGGCCTACTCGGTGACCCAGCTGGCAGGCAAGCTGCAATCCCAGCTCGACGCCGCCGCGCGCATCGTCGGCAACGCCGAAGTGATGATCAAGACCG AGCAGGTCACCTCCCAACTCAGCCAGCAGGCCCTGGGCGCCGCCAGCGAGGCCCACGCCAGCAGCGCCGAAGGGCGCACGGTGCTGGGGGAATCCATCAG CCGCATGCACCTGCTCAGCCAGCGCGCCAATGGCAGCCGTGAGCTGATCGAGGCCCTGAGCCAGCGCAGCGAGGAGATCCAGCGGGTGACCCTGGTGATC CAGTCCATCGCCAGCCAGACCAACCTGCTGGCGCTGAATGCGGCCATCGAGGCGGCCCGGGCCGGGGAACACGGGCGCGGTTTCGCGGTGGTGGCCGATG AGGTGCGCGGGCTGGCCGGGCGCACCGCCGCGGCCACCGACGAGGTCGGGGTGATGGTGGCAGATATCCAGCAGCGCACCAGCGACGTGGTGGAGCAGAT CCGCCAGCTGGCCGACGACCTCAACCTGGGGGTCGAGCAGGTGGAGCACACCGGTCGTCACCTGGACAACATCGCGCGCCTGGCGGCCGGGGTGGAAGGG CAGGTCAGCGAGATCGCCCGGGGCGCCGAGACCAACCGCGAGCAACTGGACAGCCTGTTTCATGCCGTGGAGCAGATGCGCAGCGACCTGGCGGTCAGCG ACCAGCAGACCCGCAGCCTGGCGCAGGCCGCGGTGCAGATGGAAGGGCAGGCGGAAACCATCAGCGAACGCCTGGCGGCGGTGGGCCTGGATGACTATCA CCAGCGCATCTACGACCTGGCCCGCGAAGGCGCGCGGCGCATTGCCGAGCAGTTCGAGGCCGACCTGGAGCAGAACCGCATCAGCCTCGACGATCTGTTC GATCGTCACTACCAGTTGATCGCCAACACCGACCCGGCCAAATACCAGACCCGCTTCGACCGCTACACCGATCAGGTGCTGCCGCCGATCCAGGAATCCC TGCTGCCGCGCCACGATGGCCTGGTGTTCGCCATCGCCTGTACCCAGGAAGGCTACGTGCCGACCCACAACAAGGTTTTTTCCCAGCCGCTGACCGGCGA TCCCGAGGTGGACAACCTGCATAACCGCAGCAAGCGCAAGTTCGCCGACCGCACGGGGATCCGCTGTGGCAGCCACCAGCAACCGCTGCTTCTGCAGACC TATACCCGGGATACCGGCGAGCTGATGCATGACCTTTCGGTGCCGATCATGGTCCGCGGCCGGCACTGGGGCGGGCTGCGCCTGGGTTACAAACCCGAGC AGGCGCCAGGCTCGGGCAAGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCTCCATTGTTACGCTATCGGTAATGCTGCAATGCAGGAACAGGCTGTTCCAGGGGCCGGCAAGTTAGTTAGTATGCCAACATCGTTAGGCAGCTAAC TAATTTTCTGGAGGTAGCTCCATGCACAGCAAAGTCGATGTAGCGGTGATGATTGGCAGCGGCGTGCCAGCCAGCCTGCGGGCCGAGGGCCGTCGTGCGT GCTGGGTGGTTCTGGTCAATGGCGAACAGCGCGGCACGGCCTTTGCCAGCCGCGCCGAGGCCGAGGAGTGCCGGCTGGCCTGGCAGCAGCAGCTGCAGGT GCTGCTGCCCGGCGGCCGGCACCTGCGGCATTCGGCTTAACCGGCCTGGTGCAGGCGCAGGTTGAGCTCGTCCACCACGGGCGCCCAGTCGGCGTCTTCG CGCAGTTGCTGTTTGAGAAAGGCCGCTTGCTGGGGCGTCCAGAAGGGGGCGTCGATCATTTTCAGGTCTTCGTCCAGGGGCGAGTGCCGGGCGATGAAAC
Amino Acid Sequence
>methyl-accepting chemotaxis protein
MSRDGSLAAPVAQPLATPETAARWWAPSLQSAALMALFAGQALGGWSLYLCLPVAVLVIWLPRLRGRGRPLVANATADDQLSALTRDLSYGTTHNALSAA GVAYSVTQLAGKLQSQLDAAARIVGNAEVMIKTEQVTSQLSQQALGAASEAHASSAEGRTVLGESISRMHLLSQRANGSRELIEALSQRSEEIQRVTLVI QSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGRTAAATDEVGVMVADIQQRTSDVVEQIRQLADDLNLGVEQVEHTGRHLDNIARLAAGVEG QVSEIARGAETNREQLDSLFHAVEQMRSDLAVSDQQTRSLAQAAVQMEGQAETISERLAAVGLDDYHQRIYDLAREGARRIAEQFEADLEQNRISLDDLF DRHYQLIANTDPAKYQTRFDRYTDQVLPPIQESLLPRHDGLVFAIACTQEGYVPTHNKVFSQPLTGDPEVDNLHNRSKRKFADRTGIRCGSHQQPLLLQT YTRDTGELMHDLSVPIMVRGRHWGGLRLGYKPEQAPGSGKG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site