Pseudomonas protegens CHA0, PFLCHA0_c23380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
TCAGCGACATGTTCCGCCGGGAACTGGGGGTCGCGCCTTCCCAGTACGCCAGCGCCAGCCAGGTGTAGCCGCTGCCACAGGCTCGGGCCGCGTTCGGACG AACGGCTCCGCAGGAGACGTGAAGATCCGGAGAGCGCCGGATGTGCATCAGGCGGACGCCAGCCAAGCGACCGCCAGGGTTTCGGCCTTGGCCGAAATCC TGAAGCACTTGGCCGATGCCGCGGGACCGTGCCACCTAGACTGTGCCGCACACGCCACTTCACCCCGGCATGAGCCGCACGGCCTCTGGAGCGCAGCATG AACTACCTGATTTCCCTGGCCGCCGGCCTGTTGGTCGGCCTGCTTTACGGCGCCTTGCAGGTGCGTTCTCCGGCGCCGCCGGCAATCGCCCTGGTCGGCC TCTTGGGCATGCTCGGCGGTGAGCAGTTGTGGCCCCTGGGGCGCCAGTTGCTCGGCAGCTGGCTGTCCTGAACAGGCATTTTTCCTTTCTCCCCCGACTC
DNA Sequence for Gene
>PFLCHA0_c23380
ATGGAACCGACGATGAAAGCACTGCAATTTTCCGCCACCGGCGACCTCGCGGCCCTGCACGTAGTGGACCTGCCCACCCCGGTGCCGGGTGCTGGCCAGG TGCTGGTGCGCATCAAGGCCGCGGGCCTCAACCCCAGTGATGTGAAGAACGTCCTCGGGCGCTTTCCCTACACCACACTGCCGCGGGTGCCCGGGCGGGA CTTTGCCGGGGTGGTGGAGCAGGGGCCGGCGCAACTGCTGGGCCAGGAAGTCTGGGGCACCGGTAAGGAGCTGGGCTTCTTCGCCGACGGCAGCCATGCC CAGTACGTGGTGCTGTCCGCCCAGGGCGTGGCCCGCAAGCCACGGCACCTGAGCTTTGCCCAGGCCGCAAGCCTCGGGGTGCCCTACACCACGGCCTGGG ATGCCCTGGAGCGCAGTGGCGTAGCCCGTGACACCCGGCTGCTGGTGATCGGCGGCGGCGCGGTGGCCTCGGCGGCCCTGGCCCTGGCCAAGGTGCGCGG CGCCCGGGTGCTGGCGGCGGCGCGCCGGGTGGAGCAGGTCCAGGCGCTTGAAGCCCAGGGCTACCCGACCTTGCACCTGCAACAGCCGGAAACCCTGGCG GCCCAGGTGGCCGAAGTCTATGCCGGCGGTGCCGAGGTGATCTTCGACACCACCGGCTTCTGGCTGCCGGCCTCGGTGCCGGCCCTGGCCACCTTTGGCC GCATCGCCATCATCGCCGCCCCGGTGGACGGCCATGTGCAACTGCCGGCCCTGGCGCTGTACCGCAAGGGTGGCTCGGTGGTGGGGATCAACTCGCTGTT GTATGGCGTAGAGGCGTGCGCGGCGATGCTGGAGCAGTTCGGCCGCTATTTCGATGAAGGCCTGCTGCCGCTGCCGGAAGGCCTGGTGGAATCGCCGCTG GAGCGGGGGCTGGAGCGTTATGCCGAAGTGAACCAGGGGCGCGGCGAAAAAATCATCCTCATCCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGCAGCGGCCATCCCTGCGTAGGAGCCCGCCTGCTGGCGAAGGGGCCCTGAGATCGCCTTCGCCGGCAAGCCGGCTCCTACGGGGGATGCGTGCGCCGT GTGTTCTGTGTAGGAGCCCGCTTGCTGGCGAAGAGGGCCCAGAGATCGCTTTCGCCGGCAAGCCGGCTCCTACGGGGGATGCGCGCGCTGTGTGTCCTGT GTAGGAGCCCGCTTGCTGGCGAAGGGGCCCTTGAGATCGCTTTCGCCGGCAAGCCGGCTCCTACGGGGGATGCGTGCGCTGCGTATTCTGTGTAGGAGCC AGCTTGCTGGCGAAGAGGGCCTTGAGACCTCCATCGCCGGCAAGCGGAACGCCGCCTGGCCGCTCCCGGGAGAGAAATCAGGTCTCGGGCACGCCCTTTT CCCAGGCCGACCAGTTGCCGAGGATGTCCTGCACCAGGGGGTTGCCCGCCCGGTAGAGGTTTTCCAGGGCCGGGACAAAGCCGCCCTGGTCGGCGTACTT
Amino Acid Sequence
>oxidoreductase, zinc-binding protein
MEPTMKALQFSATGDLAALHVVDLPTPVPGAGQVLVRIKAAGLNPSDVKNVLGRFPYTTLPRVPGRDFAGVVEQGPAQLLGQEVWGTGKELGFFADGSHA QYVVLSAQGVARKPRHLSFAQAASLGVPYTTAWDALERSGVARDTRLLVIGGGAVASAALALAKVRGARVLAAARRVEQVQALEAQGYPTLHLQQPETLA AQVAEVYAGGAEVIFDTTGFWLPASVPALATFGRIAIIAAPVDGHVQLPALALYRKGGSVVGINSLLYGVEACAAMLEQFGRYFDEGLLPLPEGLVESPL ERGLERYAEVNQGRGEKIILIP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site