Pseudomonas protegens CHA0, PFLCHA0_c17610 (braZ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens CHA0, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACTGCTCCTCCGGGCAAGCGCATGGGCCATGCTGGCGCAATCATCTCTGGCGGCAAAGGCACTGCAGACGAGAAATTCGCTGCTCTGCAAGACGCCGGT GTAAAAACCGTGCGTTCGCTGGCAGACATCGGCAAGGCCCTGGCCGAGCTGACCGGTTGGGCTGTCAAGTAAGCCTCGCGCTTAGCTGACGCAAAACCAG CAAAGGCCACCTTCGGGTGGCCTTTGTGCTTTCTGCCGTAGGAGACCTGCATCCTGCACAGAGCCTGGGGGAAATATAATTTCAAAAATGCGACATCATT CTGTCGCATATCGGATAGTTCGCCCTGGAACAGTGCGCTTGTCTTACCGATTCTGTAATCTAGCCGCCTCTTTTTGCGTCTGCTGCCCACAAGGTCGCTG CGCGCTAAACGGGTCAGTCTTATACGGACTGGCAGCATTTCCCTCACCCATAAGGGAAATCCCTCTCTAAATTCCGATTCAGTAGTGTGGTATTTCCTTA
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| DNA Sequence for Gene |
>PFLCHA0_c17610
|braZ
ATGAAAGTGTTGAAAGGCCAGGACATCCTGGCACTCGGCTTTATGACTTTTGCCCTGTTCGTCGGGGCCGGCAACATCATTTTCCCGCCTATCGTCGGCC TGCAGTCCGGACCCCATGTCTGGATGGCGGCGCTGGGCTTCCTGATCACCGCGGTCGGTCTGCCGGTGATCACCGTGGTTGCCCTGGCCAAGGTCGGCGG CGCCATGGACGCGCTGAGCACGCCTATCGGCAAGCTGGCCGGTGGCCTGCTGGCAGCGGTCTGCTACCTGGCGGTAGGCCCTCTGTTCGCCACGCCACGT ACCGCTACCGTGTCCTTTGAAGTGGGCCTGGCGCCGTTGACCGGCGAAAGCCCGCTGGCCCTGTTCCTCTACAGTTCGGTGTACTTCCTGCTGGTGTTCT TCATCTCCCTGTACCCGGGCCGGCTGCTGGACACCGTCGGACGCTTCCTGGCGCCGCTGAAGATCATCGCCCTGGCTGTGCTGGGCATTGCGGCCTTTGC CTTGCCCGCCGGCGACATCGGCACCGCCACTCCCGAGTACGTTGCAGCACCGTTCTCCCAGGGCTTCATCAATGGTTACCTGACCATGGATACCCTGGGC GCGCTGGTGTTCGGCATCGTCATCGTCAATGCCATCCGTTCCCGCGGGGTCGAGTCGCCTCGGCTCATTACCCGTTATGCCGTGATCGCCGGCCTGATCG CCGGGGTCGGCCTGGCGCTGGTCTACGTCAGCCTGTTCCGCCTGGGCTCGGGCAGCCATGAAGTGGCCGCCGGTGCTAGCAACGGCGCCGCGGTATTGCA CGCCTATGTGCAGCACACCTTCGGTTCCCTGGGCAGCGGTTTCCTCGCGGTGCTGATCTCCCTGGCCTGCCTGGTGACCGCCGTGGGCCTGACCTGCGCC TGCGCCGAGTACTTCAGCCGTGTCCTGCCGCTGTCCTACAAGACGCTGGTGGTGATCCTCGCGGCGTTCTCGCTGCTGGTATCGAACCTGGGCCTGACCA AGCTGATCGCGTTCTCGATCCCGGTGCTGACCGCGATTTACCCGCCGTGCATCGCCCTGGTGGCCCTGAGCTTCTGCAAGGACTTCTGGCAGGACCAGCG CCGTATCGTCGGCCCGGTGATGCTGGTGTCCTTCGTGTTCGGCCTGATCGATGCCCTCAAGGGCGCGGGCCTGGCCGGCTGGATGCCAACCCAGCTGTCG CACTTGCCGCTGAGCGAGCAGGGCCTGGCGTGGCTGGTGCCGTCGGTGATCGTGCTGGTGGTGGCAGTGATCTGCGATCGCCTGCTGGGCAAGCGCAGCG AAGCCCTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGAAGTTGATGGCCCGGGGTCGCCACAAGCGGCCCCCGAGCCCCCTAAAAAATGCCCCGCATCGATGGATGCGGGGCATTTTTTATGGGCGTACAGCG GTGTCTTTTTCCCCTGCGGGGCGTCGAAGCAGTGCCCTTTGCTTTTGTCTTCTGCCAACGCCTTACAGGAATTTGCATGTCGTTCGTTCAAGCCAACCTG ATCCACCTACTGGCCGCCCTGTGGTTCGTCGTCTGCTGGGGTGGCTATACCCGCTACGCCAGTTGGAAGGGAAGGGACACCGCGTGCCTGGCCAGCGTCC TGCACCTGTATCGCGAGGACTGGATGCGCCGCATGCTGCTGCGGGACAACCGCATCGCCGATGCCAGCGTGATCGGCAACCTGGAGCGCAATGCCTCGTT CTTCGCCTCCAGTACCCTGATCATCCTGGCGGGCATTCTCACCGTGCTGGGCGCCTCGGAGCGTGCAGTGTCGCTGTTGGCGGACATTCCGATGGTCCAG
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| Amino Acid Sequence |
>branched-chain amino acid transport system 3 carrier protein BraZ
MKVLKGQDILALGFMTFALFVGAGNIIFPPIVGLQSGPHVWMAALGFLITAVGLPVITVVALAKVGGAMDALSTPIGKLAGGLLAAVCYLAVGPLFATPR TATVSFEVGLAPLTGESPLALFLYSSVYFLLVFFISLYPGRLLDTVGRFLAPLKIIALAVLGIAAFALPAGDIGTATPEYVAAPFSQGFINGYLTMDTLG ALVFGIVIVNAIRSRGVESPRLITRYAVIAGLIAGVGLALVYVSLFRLGSGSHEVAAGASNGAAVLHAYVQHTFGSLGSGFLAVLISLACLVTAVGLTCA CAEYFSRVLPLSYKTLVVILAAFSLLVSNLGLTKLIAFSIPVLTAIYPPCIALVALSFCKDFWQDQRRIVGPVMLVSFVFGLIDALKGAGLAGWMPTQLS HLPLSEQGLAWLVPSVIVLVVAVICDRLLGKRSEALA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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