Pseudomonas protegens CHA0, PFLCHA0_c16880 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
CTTCGAGTACATAAACTCGGAAGTGAACCCGGCCATGGCCAACATCGTCGGTCCCAGCGAAGCCATTGTGGTGTCGACCTTCCACATCGAGCTCGATGGC GGTGGCGGCGACCTGCACGTGACCATGCCGTATTCGATGATCGAGCCGATCCGCGAAATGCTCGACGCCGGCTTCCAGTCCGACCTGGACGACCAGGACG AACGCTGGAGCAAGGCTCTGCGCGAGGACGTGCTGGATGTGGCCGTGCCGCTGAGCGCCACTGTCGCCCGTCGTCAGTTGCGCCTGCGGGACATCCTGCA CATGCAGCCTGGCGATGTAATCCCGGTGGAACTGCCCGAAGACATGATCATGCGCGCCAATGGCGTGCCGTCGTTCAAGGTCAAGCTGGGTTCCCACAAG GGCAACCTGGCGCTGCAAGTGATCGAGCCGATCGAGCGCCGTTGAGCGGCGCTCCAACCTGTTTGCTGTTCAATGAATTTTTGCCCGTCGAGGACCCAAG
DNA Sequence for Gene
>PFLCHA0_c16880 |fliN
ATGGCTGACGAAATTAACTCCCAGGACGACCAGGCGCTGGCCGACGAGTGGGCTGCTGCGCTGGAAGAAACCGGTGATGCCGGTCAGGCGGATATCGATG CCCTGCTGGCGGCGGATGCCGGCGCCGCGTCAAGTTCCGGGCGCTTGCAGATGGAAGAGTTCGGCAGCGTGCCGAAGAACCATGAGCCGGTCACCCTGGA CGGCCCTAACCTGGACGTGATTCTGGATATCCCGGTATCGATCTCCATGGAAGTGGGCAGCACCGATATCAACATTCGCAACCTGCTGCAGCTCAACCAG GGCTCGGTGATCGAGCTCGATCGCCTGGCCGGCGAGCCGCTGGACGTGCTGGTCAACGGCACCCTGATCGCCCATGGCGAGGTGGTTGTGGTCAACGAAA AGTTCGGCATTCGCCTGACTGACGTGATCAGCCCCAGCGAACGCATCAAGAAGCTGCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAACAAGCTGCTTGGCATTGCATTTGCGCTGCCCCTGAGCGCCCTGGCCGCGGAGCCGGCGGCCACCGCCGCGGTGGCTGCGGCTGCGCCCGTGACCG GCAGTGTCAGCGGCCAGTTGACCCAGCTGGTACTGGGCCTGCTGCTGGTGATCGGCGTGATCTTCTTCCTGGCCTGGCTGTTGCGCCGGGTGCAGCAGGC CGGTCCTGCCGGCAAGGGGCAGGTGATCGAACTGATCGGCTCCCGGGCTCTGGGCCCGCGCGATCGCCTGGTGCTGGTGCAGGTTGGCAACGAGCAGATC CTGCTGGGCCTGACCCCGGGCACCATCACCCCGTTGCATGTACTCAAGGAGCCGGTGCAGGTGCCCAGTGCCGAGCAGGCGACGCCCGAGTTCGCCCAGC GCCTGATGGAGCTGTTGGGCAAGGATCAGAAGGATAAGAAGTAATGCCGTTGCGCATCATCTTGACGTTGGCACTGATGCTGGCGGCGCCGCTGGCGTTG
Amino Acid Sequence
>flagellar motor switch protein FliN
MADEINSQDDQALADEWAAALEETGDAGQADIDALLAADAGAASSSGRLQMEEFGSVPKNHEPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQ GSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site