Pseudomonas protegens CHA0, PFLCHA0_c16340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
CATGCCGGGAGCGCTGGAAGGCGCCCGGGCGATCCAGCAGGAACTGGGGGACAGCGGCAATGCACCGGCGCGGCCGCACTTTGCCGACTACCTGGTGCGT GCCGGTTTCGTGAAGGATCGCGCCGAGGCGTTTCGCAAATGGCTGGGGGCCGGCAAGCTGGGGGACGTCAAGCAGCACTGGCCGACCCTGGAAGAAACCG TCGGCACACTGCGGGCCGCGGGGGCCTGGGTCAGCCTGGCCCATCCCTGGCATTACGATTTCACCCGCAGCAAGCGTCGCCGCTTGATTGCCGACTATAT TCAAGCCGGTGGTCATGCTATCGAAGTGGTCAATGGCCACCAACCTGCAGAGCAAGTGGGCAGTTTGGCTATCCTTGCTCGTGAATTCGGACTGCTGGTC AGCGCTGGCAGTGACTTTCATGGCCCTGGAGGCTGGTCCGAGATTGGTGAGTATCGCCCGGTCCCGGAAGACCTGCCGCCCCTTTGGTGTCGGTTCAAAC
DNA Sequence for Gene
>PFLCHA0_c16340
ATGAGCCAATTATTGCCGCCTGAACAGGTAGAGACAGTGAGTCAATTTTTCCAGATCCACCCGGAAAACCCCCAGCCACGCCTGATCAAACAGGCCGTCG AGATCATTCGCAGCGGCGGTGTGGTGATCTATCCCACGGATTCGTCCTACGCCGTCGCCTGCCAGATGGGCGACAAGGGCGCAATCGAACGGGTTCGACG CCTGCGCCAGCTGGACGACAAGCACAACTTCGCGCTGATCTGCAGCGACCTTTCGCAGTTGGGCCTGTTCGCCAAGATCGACACGGGCACTTTCCGTCTG CTCAAGGCCCATGTGCCGGGGCCCTACACCTTCATTCTCAACGCCACCCGGGAAGTGCCGCGCCTGCTGCTGCACCCCAAGCGCCGGACCATCGGCCTGC GGGTGCCGAGCAACCCGATCGCCCTGGCGCTGCTGGCCGAGCTGGGCGAGCCGCTGATGAGCGTCAGCCTGATCATGCCCGGTGATACCGAGGCCCTGAG CGACCCCTACGAGATGCGCCAGTTGCTGGAGCACCAGGTGGACCTGATCATCGATGGCGGTTTCGGCAGCACCGAGTCGTCCACGGTGATCAATCTCGCC GACGGCGAGCCGGAAGTGATCCGCGTCGGTTGCGGCGACCCCGCGCCGTTCATGGCCGAGGCCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGTCCGCAGTGGAAACCGTCGACGACCAGGCCGGCGCCCAGCAGGAGCTGCCCTTCGCCATGGTCTACGGCCAGGCGGTCATGGAAATGCCCCTGGACC TGTACATCCCCCCGGATGCCCTGGAAGTCTTTCTCGAAGCCTTCGAAGGCCCGCTGGACCTGCTGCTATACCTGATCCGCAAGCAGAACATCAACATCCT CGACATCCCGGTGGCGGAGATCACCCGCCAGTACATGGGTTATGTGGAGCTGATGCAGTCGGTGCGCCTGGAACTGGCCGCCGAGTACCTGGTGATGGCG GCAATGCTTGCCGAGATCAAGTCGCGCATGCTCCTGCCGCGCTCAGCCGAGGTCGAGGAAGAAGAGGACGATCCGCGGGCCGAACTGATCCGCCGCCTGC AGGAATACGAGCGCTTCAAGGCGGCCGCCGAGGGCATCGACGGCCTGAGCCGGGTCGGTCGCGATGTGCTGGTGCCCAAACTCGACGCCCCGGAGGCCCG
Amino Acid Sequence
>hypothetical protein
MSQLLPPEQVETVSQFFQIHPENPQPRLIKQAVEIIRSGGVVIYPTDSSYAVACQMGDKGAIERVRRLRQLDDKHNFALICSDLSQLGLFAKIDTGTFRL LKAHVPGPYTFILNATREVPRLLLHPKRRTIGLRVPSNPIALALLAELGEPLMSVSLIMPGDTEALSDPYEMRQLLEHQVDLIIDGGFGSTESSTVINLA DGEPEVIRVGCGDPAPFMAEA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site