Pseudomonas protegens CHA0, PFLCHA0_c15040
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0009289 | pilus |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.60.40.1090
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0007155 | cell adhesion |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.60.40.1090
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00419 | Fimbrial protein | IPR000259 | Fimbrial-type adhesion domain | 235 | 379 | 3.6E-11 |
| PANTHER | PTHR33420 | FIMBRIAL SUBUNIT ELFA-RELATED | - | - | 48 | 380 | 5.2E-19 |
| Gene3D | G3DSA:2.60.40.1090 | - | IPR036937 | Fimbrial-type adhesion domain superfamily | 231 | 379 | 1.9E-17 |
| Gene3D | G3DSA:2.60.40.3310 | - | - | - | 62 | 224 | 7.0E-6 |
| SUPERFAMILY | SSF49401 | Bacterial adhesins | IPR008966 | Adhesion domain superfamily | 243 | 379 | 5.41E-13 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.