Pseudomonas protegens CHA0, PFLCHA0_c13390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas protegens CHA0, complete genome. [Details]
DNA Sequence Upstream of Gene
CAGTCCGTGTCTGAATTGCGGTGCCTGCTGTTCATACTTTCGTGTGTCTTTTTTCTGGGGCGAATGCGCCTCATCCGGCGGGACTGTCCCCGACGAGCTG GTGCAAAGTATCAGCCCCAGCCGGGTGGCAATGCTCGGAACCGACTGCAAATCCCCGCGCTGCATCGCCCTTGAAGGCGAGGTCGGCCAGGGTGTGAGCT GTTCGATCTATGACCAGCGCTCCAGCCCGTGCCGCGAGTTCGAGGCTTCCTGGACCGACGGCCAGCCCAACAGCGACTGCGACGCCGCCCGCGCCGCCTT CGGCCTGGCCCCCCTGGAACCGGCGGACACCGAGCCCTGGTACGAGGAAAGCGCTTAGCACCTTTGGCGATAGGGCCCATAAGCAAATCATTAGCAGCAG CGTGCCACCTCCCATTGCAGCCAGCGGGTGCCTTCTATACTCCAAGCACTCGTTGGCGCGCGGCTCCGCCGACCTCAGATGACTCAGAGATGGGCAGGCT
DNA Sequence for Gene
>PFLCHA0_c13390
ATGGACTGGCTGGGCGTGCATTTCATTACCGAGCTTCCTCAGGCCGGGCAAGTGGTCCTGCATTGCACCCACAACCCGGTTCTGGTGCTTCTGGCCTACC TGGTAGCCTGTGCCGCCAGCTTCGCCACCCTGGACATGGCCGAACGTGTCAGTCATGCCGAACGACCGGCCAGCCAGCGCCTGTGGCGCTGGGTCGGAGC CTGCTGCCTGGCCGGGGGGATCTGGGCCATGCACTTCATCGCCATGCTGGCGTTCGAGGCGCCGCTGCAGATCCACTACGACCTGCCCCTGACCCTGCTG TCGCTCCTGATCGCGCTGGTCGCCGCCTGGCTGGCGATGAACACCCTGAGCCACGCGCACATGCCGCTGTGGCGCTATGGCGTTGCTTCGATCTGGATCG GCCTGGGCATCGCCGCCATGCACTACGTCGGCATGGCGGCCATGCGCAGCAGCGCCAGCCTGTACTACGACCCCTTACTGATGGCGCTGTCGGTATTGGT GGCGATCGCCTGCAGCCTGGCGGCGCTGCTGCTGTCCCGTCACCTGCGCGAAGGCAGCGGCATGTTCCACCAGTTGCTCAAGTACGCCAGCAGCCTGGTG CTGGGCGCTGCCATCGTGCTCATGCACTTCACCGGCATCTGGGCCATGACCCTGGTGCTGCCCGCCGGCAGCCTGCCCGCCCCCGCCGCATCCGATGGGC ATCTGCAACTGGGCCTGACCCTGAGCGCGATCGTGCTCTTGATCATCGGCAGCGGCATCAGCGCGGCCCTGGCCGACAAGAAGCTGCAACACAAGGAGCG GGACCTGCGGCGGGTCAACGCCCTGCTTTCGCAACTGGACCAGGCCCGGGTTTCCCTGCAGCAGGTGGCCCACTACGACGCCCTGACCAACCTGATCAAC CGCCGCGGCTTCAACCAGTTGTTCGCCGAAAAGCTCATCGAGAAAACTACCTTTGGCGGCATGCTGGCGGTGATGTTCCTCGACATCGACCACTTCAAGC GCATCAATGACAGCCTCGGCCACGATGCCGGGGACGAGTTGCTGAAAGTCATCGCCGGGCATATCAAGAGCTCCACCCGCAGCCATGAAGACGTGGTGGC ACGCCTGGGCGGCGACGAGTTCTGCATCCTCATCAATCTGTACGACCGCGAAGAAGCCCGGCAGATGGCCCAGCGCATCATGCTGAAAATGAAGGAGCCG ATCGAACTGGGGGGGCGACGCATGGTGATGACCACCAGCATCGGCATCAGCGTCTTCCCCGATGACGGCAAGACCTGCGAGGAGTTGCTCAAGAACGCCG ACCTGGCCCTGTATCAATCCAAGGATTGCGGGCGCAACAGCCTGCATTTCTTCAACTCCCACCTCAAGACCCGGGCCACCCTGGAACTGCAACTGGAAGA GGAATTGCGCAACGCCCTGCGCGACGACCAGGGCCTGCTGCTGTATTACCAACCTATCTACGACCTCAAGAGCGGCAGGGTCACCAAGCTCGAAGCCCTG ATCCGCTGGCAGCACCCGCAACATGGGCTGCTGACCCCGGATCGCTTCATCTCCATTGCCGAAGCCAACGGCATGATCGCCGAGCTGGACAACTGGGTGC TGCGCAAGGCCTGCGCGGACCTGGCCTACCTGTCGCGCCATGGCGGTGGCGAACTGAAGATCGCGGTCAACTGCTCGGCCCTGAACCTGACCCGCGAAGA GCTCGCCGGGGAGATCGAAAGCGCCCTGCGCCAGGCCCAGGTGGCGCCGCAGCGGCTGGAGCTGGAAGTCACGGAAAACGCCCTGATGGGCAATATTGCC AGCACCCTGGCGCTGCTCAAGCAGATCCGCGGGCTGGGGGTGTCGCTGTCGATCGACGACTTCGGCACCGGCTACTCATCCCTGGCCTATCTCAAGCGCT TGCCCCTGAACACCCTGAAGATCGATCGCTCGTTCATCCAGGACATCCCCAAGTCGACCCAGGACATGGAGATCGTCCAGGCGATCATCATCATGGCCCA CACCCTGCACCTGCAGGTGGTCACCGAAGGGGTCGAAACCCCGGAACAGCAAGCGTTTCTCCAGCACCATGGCTGCGACTACCTGCAGGGCTACCTGCTC AGCCATCCGGTGCCGCTGCGGGAGTTGCGCGGGGTGCTGGAGGAGCTCGACCAGCGCCACGCCGCGCCGATCAATCCGCGGGCGCCGGGTCCCGATAAAG GCGAACCAGGGTCGCTGGATCTTTTTCCAGATAGCCCTGCCCACCATGCAGACGCATCAACTGCGCAGCTAATCCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCGTCGCCGAGCCTTGTTCGCGGGAAAACTTCACCGCTCCATCCAGGTCCTTGAGCAGGGTGCGCACATGCCACTTCACCGGCTCGAACCGGCTTTC AGCCATTTGCGGGGCCAGGATCTGCAAAGGTTTCGAGTCGGCAAAGCCACCGGCCAGGGCCTCGGCGATCAGCCGCGCATCCACCCCCGAGCGCTCGGCC AGGGCCACCACCTCGGCGATCACCAGGGCGTTGCAGGCGACGATCATCTGGTTGCAGGCCTTGGTCACCTGCCCGGCGCCCACCGCCCCCATGTGCGTGA CCCGCTGCCCCAGGGTCAGCAGCACTGGCCGCACCCGCTCGACGTCCGTCGCCTCACCGCCAACCATGATGGCCAGGCTGCCGGCCTCGGCGCCCGGGGT ACCGCCGGACACCGGCGCATCGACCCAGGCCACGCCGCGGCTTGCGGCCAGTTCGGCGGCCATTTCCCGGGTAGCCGTGGGTTCCAGGCTGGACAGGTCC
Amino Acid Sequence
>signaling protein
MDWLGVHFITELPQAGQVVLHCTHNPVLVLLAYLVACAASFATLDMAERVSHAERPASQRLWRWVGACCLAGGIWAMHFIAMLAFEAPLQIHYDLPLTLL SLLIALVAAWLAMNTLSHAHMPLWRYGVASIWIGLGIAAMHYVGMAAMRSSASLYYDPLLMALSVLVAIACSLAALLLSRHLREGSGMFHQLLKYASSLV LGAAIVLMHFTGIWAMTLVLPAGSLPAPAASDGHLQLGLTLSAIVLLIIGSGISAALADKKLQHKERDLRRVNALLSQLDQARVSLQQVAHYDALTNLIN RRGFNQLFAEKLIEKTTFGGMLAVMFLDIDHFKRINDSLGHDAGDELLKVIAGHIKSSTRSHEDVVARLGGDEFCILINLYDREEARQMAQRIMLKMKEP IELGGRRMVMTTSIGISVFPDDGKTCEELLKNADLALYQSKDCGRNSLHFFNSHLKTRATLELQLEEELRNALRDDQGLLLYYQPIYDLKSGRVTKLEAL IRWQHPQHGLLTPDRFISIAEANGMIAELDNWVLRKACADLAYLSRHGGGELKIAVNCSALNLTREELAGEIESALRQAQVAPQRLELEVTENALMGNIA STLALLKQIRGLGVSLSIDDFGTGYSSLAYLKRLPLNTLKIDRSFIQDIPKSTQDMEIVQAIIIMAHTLHLQVVTEGVETPEQQAFLQHHGCDYLQGYLL SHPVPLRELRGVLEELDQRHAAPINPRAPGPDKGEPGSLDLFPDSPAHHADASTAQLIR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site