Pseudomonas protegens CHA0, PFLCHA0_c06640 (cobG)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0009236	cobalamin biosynthetic process	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	19068481	Reviewed by curator
Molecular Function	GO:0016491	oxidoreductase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF55124	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0051536	iron-sulfur cluster binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01077	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0020037	heme binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01077	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pprc00860	Porphyrin and chlorophyll metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR02435	JCVI: precorrin-3B synthase	IPR012798	Cobalamin (vitamin B12) biosynthesis CobG-like	6	396	4.1E-117
Pfam	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain	IPR005117	Nitrite/Sulfite reductase ferredoxin-like domain	24	81	6.0E-11
Gene3D	G3DSA:3.30.413.10	Sulfite Reductase Hemoprotein, domain 1	IPR045854	Nitrite and sulphite reductase 4Fe-4S domain-like superfamily	89	245	1.5E-64
PANTHER	PTHR32439	FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC	-	-	23	390	1.1E-66
Gene3D	G3DSA:3.90.480.10	Sulfite Reductase Hemoprotein;Domain 2	-	-	25	311	1.5E-64
SUPERFAMILY	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like	IPR036136	Nitrite/Sulfite reductase ferredoxin-like domain superfamily	207	324	2.24E-19
Pfam	PF01077	Nitrite and sulphite reductase 4Fe-4S domain	IPR006067	Nitrite/sulphite reductase 4Fe-4S domain	90	233	8.3E-15
Gene3D	G3DSA:3.30.413.10	Sulfite Reductase Hemoprotein, domain 1	IPR045854	Nitrite and sulphite reductase 4Fe-4S domain-like superfamily	331	432	6.7E-13
SUPERFAMILY	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like	IPR036136	Nitrite/Sulfite reductase ferredoxin-like domain superfamily	6	85	2.13E-14
SUPERFAMILY	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like	IPR045854	Nitrite and sulphite reductase 4Fe-4S domain-like superfamily	90	239	2.35E-24
Pfam	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain	IPR005117	Nitrite/Sulfite reductase ferredoxin-like domain	256	321	1.7E-14
SUPERFAMILY	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like	IPR045854	Nitrite and sulphite reductase 4Fe-4S domain-like superfamily	334	429	9.95E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.