Pseudomonas protegens CHA0, PFLCHA0_c04210 (opgH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens CHA0, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGTGGACTTCGAAGGCCCGTCCCTGGCGGCATTGCCGGAAAACGCCGACGTTCGCAGCCAGGTCAGCGTAGGTGACAACGCCGAGCTAGTGGAAAAC AGCGTTCGCTACAACCCGGAAACCAAGGGCTGGCGCCTGACCCTGCGGATGAAGATCAAGGACGCGAGCAAGTCCACCGAGATGCGTGCCGCTCTGGTCC GCGACATTGCGCAGCCCGAGCCGGCCAAGGCCTCGACGCCGAACTCCAACTCCTCCATCGCCAAGGCCGACAAGATCGCCGCCAAGCAGCAGGAGAAGAA AGAGAAGGAAGCCGCAGCGGCAGCCGCCAAGCAGGCGCAAGCCCAGCCGGGCAAAGAGGCTAAAGACGCCAAGAACGCCAAGGACAAGGACCACAAAGAC GCCAAGCAGCCTGCTGCTGCGGACGCGGCCCCAGCCACACCGGAACCGGTTAAAACGGAGCAAGTCCTGACCGAGACCTGGAGCTATCAGTTGCCTGCCG
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| DNA Sequence for Gene |
>PFLCHA0_c04210
|opgH
ATGAGTAACTCTCAACTACAGCCAGAGTCTCTTGCCGAGTACCTGGCGCATTTGCCGATGTCGGACCAGCAGCGCGCGGAACTCGCGGGCTGCCAGTCCT TCAGCGAATTGCACCAACGCCTGTCGTCCAGCACCTTCGATGGCCCCACCGATGCCGCCCAGGCCTCGGTGGGCCAGCGCCTGACCCTGAGCACCGCCGC TGAGCTGGAAGAAGCGGAAATGCTCGCGGTGGACGCCGAGGGCCGGGTCTGCCTCAAGGCCACGCCACCGATCCGCCGCACCAAGGTGGTCCCGGAGCCG TGGCGCACCAATATCCTGGTGCGCGGCTGGCGGCGCCTGACCGGGCGTACCAACCCGCCAGCGCCGAAGAAGGACGAACGGGTACTGCCGGCCGCTCGCT GGCGTACCGTCGGTTCTATCCGCCGCTACATCCTGCTGGTGCTGATGCTCGGCCAGACCATCGTCGCCGGCTGGTACATGAAAGGCATCATGCCGTACCA GGGCTGGTCCTTCGTCGACCTGGAAGAGGTCATGCACCAGCCGCTGATGCAGACCGCCCAGCAAGTGCTGCCCTATGCCCTGCAGACCAGCATCCTGATT CTGTTCGGGATCCTGTTCTGCTGGGTCTCGGCAGGTTTCTGGACCGCGCTGATGGGCTTCCTGGAACTGCTGACCGGCCACGACAAGTACCGCATCTCCG GGGCCAGCGCCGGCAACGAGCCGATTCCCAAGGATGCGCGCACCGCACTGGTGATGCCGATCTGCAACGAAGACGTGCCCCGGGTGTTTGCCGGCCTGCG CGCGACCTTCGAGTCGGTGGCGGCCACCGGTGACCTGGACCGTTTCGACTTCTTCGTCCTCAGCGACAGCAACGACAGCGATATCTGTGTGGCCGAGCAG CAGGCCTGGCTGGATGTCTGCCGCGAAGCCAAGGGCTTCGGCAAGATCTTCTATCGCCGCCGTCGCCGCCGAGTGAAACGCAAGAGCGGCAACCTCGACG ACTTCTGCCGTCGCTGGGGCGGTGACTACAAGTACATGGTCGTGCTCGACGCTGACAGCGTGATGAGCGGCGAATGCCTGACCAGCCTGGTACGCCTGAT GGAAGCCACGCCGGACGCGGGGATCATCCAGACCGCGCCACGGGCCTCGGGCATGGACACCCTGTATGCGCGCATGCAGCAGTTCGCCACCCGGGTCTAC GGCCCGCTGTTCACCGCCGGCCTGCACTTCTGGCAGTTGGGGGAATCCCACTACTGGGGGCACAACGCGATCATCCGCATGCAGCCGTTCATCGAGCACT GTGCCCTGGCGCCGTTGCCGGGCAAGGGTGCCTTCGCCGGTGCGATCCTCTCCCACGACTTCGTCGAAGCCGCGCTGATGCGCCGTGCCGGTTGGGGCGT GTGGATTGCCTACGACCTGCCGGGCAGCTACGAAGAGCTGCCGCCGAACCTGCTGGACGAACTCAAGCGTGACCGGCGCTGGTGCCACGGCAACCTGATG AACTTCCGCCTGTTTCTGGTCAAGGGCATGCACCCGGTGCACCGCGCGGTGTTCCTCACCGGGGTGATGTCCTACCTGTCGGCGCCGCTGTGGTTCTTCT TCCTGGTGCTGTCCACGGCCCTGCTGGCGGTCAACACCCTGATGGAGCCGCAGTACTTCCTCGAGCCGCGGCAGCTGTATCCGCTGTGGCCGCAGTGGCA TCCGGACAAGGCCATCGCGCTGTTCTCCACCACCATCGTGCTGCTGTTCCTGCCCAAGCTCTTGAGCATCATCCTGATCTGGGCCAAGGGTGCGAAAGAG TTCGGTGGCAAGTTCAAGGTGACCCTGTCGATGCTCCTGGAGATGCTGTTCTCCATGCTGCTGGCGCCGGTGCGGATGATTTTCCACACCCGTTTCGTAC TGGCCGCATTCCTGGGCTGGGCCGCGACCTGGAACTCGCCACAGCGTGACGACGACTCCACGCCGTGGAGCGAAGCGGTCAAGCGCCACGGTCCGCAGAC CCTGCTGGGCTTCTGCTGGGCGCTGCTGGTGATCTGGTTGAACCCGAGCTTCCTCTGGTGGCTGGTACCGATCGTCGGTTCGTTGATGCTGTCGATCCCG GTGTCGGTGATCTCCAGCCGCGTGGGCCTGGGCCTGAAGTCCCGTGACGAAAGCCTGTTCCTGATCCCCGAGGAATACGCTCCGCCACAGGCGCTGCTGG CAACCGACCAGTACACCCATGAAAACCGCTGGCATGCGCTCAACGACGGCTTTGTCCGGGCCGTGGTGGATCCGCAGCAGAACGCCCTGGCCTGTGCCCT GGCGACCTCGCGCCACACCCAGGCCGAGCCCATCGAGTGGCTGCGCCAGGAGCGTGTACGGCATGCTCTGAAAGTCGGCCCGGCGGCCCTGAACAACAGC GAGCGGCTGGCGCTGTTGAGCGACCCGGTAGCCCTGGGGCGCCTGCACGAGCAGGTCTGGAGCGAGGGGCACAGCGAATGGCTGAGCGCCTGGCGCCAGT CGGTGGATGCCGATCCCCATGCACCGCTGCTGCCGTTGCAGCCGCTGAACGCGGCGCCGCAACCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCCAACGCCCTTGAGCTCTTGCTCAAGGGCGTTTTGCTTTATGGCGCCAATGGCCGCCTACGCCTTGCCGGAGGCTGTGGCAGCGGCCACCGGTCGCTC CCCCTGAAACAACAAAAATCCTTGTGCAAATGGCCGAGTGCGTTAGCATCGCACCCGCAAATTTCTGCGCGCAATCGACAACGGCCTGCCATTCGAAGCA CTCAAGCAGATGACCGCCGTGCGCAGACACCACAATAAAATGGCTTCAGGGGACTTGAGATGAAGAAGTATCTTTCGCTGCTGCTGGCAGGCGCCGCCGC CATGCTGGCGGTCACTACCGCCCAGGCCGGCGCCATCGATGACGCGGTCAAGCGCGGTACGCTGAAAGTCGGCATGGACCCGACCTACATGCCGTTCGAA ATGACCAACAAGCGTGGCGAAATCATCGGTTTCGAAGTCGATCTGCTCAAGGCCATGGCCAAGTCCATGGGGGTCAAGCTGGAGATGGTTTCCACTGGCT
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| Amino Acid Sequence |
>glucans biosynthesis glucosyltransferase H
MSNSQLQPESLAEYLAHLPMSDQQRAELAGCQSFSELHQRLSSSTFDGPTDAAQASVGQRLTLSTAAELEEAEMLAVDAEGRVCLKATPPIRRTKVVPEP WRTNILVRGWRRLTGRTNPPAPKKDERVLPAARWRTVGSIRRYILLVLMLGQTIVAGWYMKGIMPYQGWSFVDLEEVMHQPLMQTAQQVLPYALQTSILI LFGILFCWVSAGFWTALMGFLELLTGHDKYRISGASAGNEPIPKDARTALVMPICNEDVPRVFAGLRATFESVAATGDLDRFDFFVLSDSNDSDICVAEQ QAWLDVCREAKGFGKIFYRRRRRRVKRKSGNLDDFCRRWGGDYKYMVVLDADSVMSGECLTSLVRLMEATPDAGIIQTAPRASGMDTLYARMQQFATRVY GPLFTAGLHFWQLGESHYWGHNAIIRMQPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLM NFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFFFLVLSTALLAVNTLMEPQYFLEPRQLYPLWPQWHPDKAIALFSTTIVLLFLPKLLSIILIWAKGAKE FGGKFKVTLSMLLEMLFSMLLAPVRMIFHTRFVLAAFLGWAATWNSPQRDDDSTPWSEAVKRHGPQTLLGFCWALLVIWLNPSFLWWLVPIVGSLMLSIP VSVISSRVGLGLKSRDESLFLIPEEYAPPQALLATDQYTHENRWHALNDGFVRAVVDPQQNALACALATSRHTQAEPIEWLRQERVRHALKVGPAALNNS ERLALLSDPVALGRLHEQVWSEGHSEWLSAWRQSVDADPHAPLLPLQPLNAAPQPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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