Pseudomonas protegens CHA0, PFLCHA0_c00720 (metI1)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:cd06261	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pprc02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
FunFam	G3DSA:1.10.3720.10:FF:000002	D-methionine ABC transporter permease MetI	-	-	9	221	6.8E-89
SUPERFAMILY	SSF161098	MetI-like	IPR035906	MetI-like superfamily	13	208	6.54E-41
CDD	cd06261	TM_PBP2	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	54	166	4.81128E-8
Gene3D	G3DSA:1.10.3720.10	-	IPR035906	MetI-like superfamily	11	218	1.9E-43
PANTHER	PTHR30450	ABC TRANSPORTER PERMEASE	-	-	4	220	7.2E-75
Pfam	PF00528	Binding-protein-dependent transport system inner membrane component	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	50	219	6.6E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.